RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 GPR15P49685 360 aa8.81□□□□□ -1
TTC28-208ENST00000612946 ESRP1Q6NXG1 681 aaKnown RBP8.81□□□□□ -1
TTC28-208ENST00000612946 SPESP1Q6UW49 350 aa8.81□□□□□ -1
TTC28-208ENST00000612946 CHERPQ8IWX8 916 aaKnown RBP8.81□□□□□ -1
TTC28-208ENST00000612946 SEPT12Q8IYM1 358 aa8.81□□□□□ -1
TTC28-208ENST00000612946 DSELQ8IZU8 1212 aa8.81□□□□□ -1
TTC28-208ENST00000612946 VPS35Q96QK1 796 aa8.81□□□□□ -1
TTC28-208ENST00000612946 EHD4Q9H223 541 aa8.81□□□□□ -1
TTC28-208ENST00000612946 FAM53CQ9NYF3 392 aa8.81□□□□□ -1
TTC28-208ENST00000612946 TBC1D14Q9P2M4 693 aa8.81□□□□□ -1
TTC28-208ENST00000612946 CYP3A7-CYP3A51PA0A087WV96 503 aa8.81□□□□□ -1
TTC28-208ENST00000612946 BBOX1O75936 387 aa8.81□□□□□ -1
TTC28-208ENST00000612946 IFNGP01579 166 aa8.81□□□□□ -1
TTC28-208ENST00000612946 CYP3A7P24462 503 aa8.81□□□□□ -1
TTC28-208ENST00000612946 MPP2Q14168 576 aa8.81□□□□□ -1
TTC28-208ENST00000612946 UBE2SQ16763 222 aa8.81□□□□□ -1
TTC28-208ENST00000612946 SV2CQ496J9 727 aa8.81□□□□□ -1
TTC28-208ENST00000612946 GOLM1Q8NBJ4 401 aa8.81□□□□□ -1
TTC28-208ENST00000612946 MRPL9Q9BYD2 267 aaKnown RBP8.81□□□□□ -1
TTC28-208ENST00000612946 CHST12Q9NRB3 414 aa8.81□□□□□ -1
TTC28-208ENST00000612946 NPAP1Q9NZP6 1156 aa8.81□□□□□ -1
TTC28-208ENST00000612946 SPAG17Q6Q759 2223 aa8.81□□□□□ -1
TTC28-208ENST00000612946 ZSCAN5CA6NGD5 496 aaPredicted RBP8.81□□□□□ -1
TTC28-208ENST00000612946 RIMBP2O15034 1052 aa8.81□□□□□ -1
TTC28-208ENST00000612946 ZNF24P17028 368 aa8.81□□□□□ -1
TTC28-208ENST00000612946 WDR72Q3MJ13 1102 aa8.81□□□□□ -1
TTC28-208ENST00000612946 STAG3L4Q8TBR4 150 aa8.81□□□□□ -1
TTC28-208ENST00000612946 ZSCAN5AQ9BUG6 496 aa8.81□□□□□ -1
TTC28-208ENST00000612946 AGXT2Q9BYV1 514 aa8.81□□□□□ -1
TTC28-208ENST00000612946 RC3H2Q9HBD1 1191 aaKnown RBP8.81□□□□□ -1
TTC28-208ENST00000612946 TBX20Q9UMR3 447 aa8.81□□□□□ -1
TTC28-208ENST00000612946 HEG1Q9ULI3 1381 aa8.81□□□□□ -1
TTC28-208ENST00000612946 ABL2P42684 1182 aa8.81□□□□□ -1
TTC28-208ENST00000612946 LSAMPQ13449 338 aa8.81□□□□□ -1
TTC28-208ENST00000612946 KCTD19Q17RG1 926 aaPredicted RBP8.81□□□□□ -1
TTC28-208ENST00000612946 FAM122CQ6P4D5 195 aa8.81□□□□□ -1
TTC28-208ENST00000612946 LRRC69Q6ZNQ3 347 aa8.81□□□□□ -1
TTC28-208ENST00000612946 MCOLN2Q8IZK6 566 aa8.81□□□□□ -1
TTC28-208ENST00000612946 URGCPQ8TCY9 931 aa8.81□□□□□ -1
TTC28-208ENST00000612946 LGR6Q9HBX8 967 aa8.81□□□□□ -1
TTC28-208ENST00000612946 ZNF334Q9HCZ1 680 aaPredicted RBP8.81□□□□□ -1
TTC28-208ENST00000612946 PTGFRNQ9P2B2 879 aa8.81□□□□□ -1
TTC28-208ENST00000612946 CRLS1Q9UJA2 301 aa8.81□□□□□ -1
TTC28-208ENST00000612946 ZSCAN5BA6NJL1 495 aa8.8□□□□□ -1
TTC28-208ENST00000612946 OR2AT4A6NND4 320 aa8.8□□□□□ -1
TTC28-208ENST00000612946 PLA2G6O60733 806 aa8.8□□□□□ -1
TTC28-208ENST00000612946 RPLP2P05387 115 aaKnown RBP8.8□□□□□ -1
TTC28-208ENST00000612946 BCAT1P54687 386 aa8.8□□□□□ -1
TTC28-208ENST00000612946 FAAP100Q0VG06 881 aa8.8□□□□□ -1
TTC28-208ENST00000612946 NADK2Q4G0N4 442 aa8.8□□□□□ -1
TTC28-208ENST00000612946 KHDC1Q4VXA5 237 aaKnown RBP8.8□□□□□ -1
TTC28-208ENST00000612946 RABL3Q5HYI8 236 aa8.8□□□□□ -1
TTC28-208ENST00000612946 BORAQ6PGQ7 559 aa8.8□□□□□ -1
TTC28-208ENST00000612946 CBR4Q8N4T8 237 aa8.8□□□□□ -1
TTC28-208ENST00000612946 SNX6Q9UNH7 406 aa8.8□□□□□ -1
TTC28-208ENST00000612946 PCDHGB1Q9Y5G3 927 aa8.8□□□□□ -1
TTC28-208ENST00000612946 DYRK3O43781 588 aa8.8□□□□□ -1
TTC28-208ENST00000612946 FADS2O95864 444 aaKnown RBP8.8□□□□□ -1
TTC28-208ENST00000612946 SMTNL2Q2TAL5 461 aa8.8□□□□□ -1
TTC28-208ENST00000612946 ARHGAP15Q53QZ3 475 aa8.8□□□□□ -1
TTC28-208ENST00000612946 DCAF6Q58WW2 860 aa8.8□□□□□ -1
TTC28-208ENST00000612946 ULK3Q6PHR2 472 aa8.8□□□□□ -1
TTC28-208ENST00000612946 REXO5Q96IC2 774 aaKnown RBP8.8□□□□□ -1
TTC28-208ENST00000612946 ZNF696Q9H7X3 374 aa8.8□□□□□ -1
TTC28-208ENST00000612946 CYP4F12Q9HCS2 524 aa8.8□□□□□ -1
TTC28-208ENST00000612946 CCNL1Q9UK58 526 aaPredicted RBP8.8□□□□□ -1
TTC28-208ENST00000612946 OXCT1P55809 520 aa8.8□□□□□ -1
TTC28-208ENST00000612946 CTBP2P56545 445 aa8.8□□□□□ -1
TTC28-208ENST00000612946 TAGLNQ01995 201 aaKnown RBP8.8□□□□□ -1
TTC28-208ENST00000612946 FNBP1LQ5T0N5 605 aa8.8□□□□□ -1
TTC28-208ENST00000612946 GPRASP2Q96D09 838 aa8.8□□□□□ -1
TTC28-208ENST00000612946 ACTR8Q9H981 624 aa8.8□□□□□ -1
TTC28-208ENST00000612946 ALOX15BO15296 676 aa8.8□□□□□ -1
TTC28-208ENST00000612946 SGTAO43765 313 aa8.8□□□□□ -1
TTC28-208ENST00000612946 CABYRO75952 493 aa8.8□□□□□ -1
TTC28-208ENST00000612946 GMPSP49915 693 aaPredicted RBP8.8□□□□□ -1
TTC28-208ENST00000612946 LIPEQ05469 1076 aa8.8□□□□□ -1
TTC28-208ENST00000612946 ARHGEF7Q14155 803 aa8.8□□□□□ -1
TTC28-208ENST00000612946 MAPKAPK3Q16644 382 aa8.8□□□□□ -1
TTC28-208ENST00000612946 WSCD2Q2TBF2 565 aa8.8□□□□□ -1
TTC28-208ENST00000612946 ZYG11AQ6WRX3 759 aa8.8□□□□□ -1
TTC28-208ENST00000612946 HERC2P3Q9BVR0 1158 aa8.8□□□□□ -1
TTC28-208ENST00000612946 DNAJC18Q9H819 358 aa8.8□□□□□ -1
TTC28-208ENST00000612946 DGKBQ9Y6T7 804 aa8.8□□□□□ -1
TTC28-208ENST00000612946 TRAPPC13A5PLN9 417 aa8.8□□□□□ -1
TTC28-208ENST00000612946 H7C1W4 665 aa8.8□□□□□ -1
TTC28-208ENST00000612946 PITPNM1O00562 1244 aa8.8□□□□□ -1
TTC28-208ENST00000612946 KLF11O14901 512 aa8.8□□□□□ -1
TTC28-208ENST00000612946 PCDHGA12O60330 932 aa8.8□□□□□ -1
TTC28-208ENST00000612946 CSPG5O95196 566 aa8.8□□□□□ -1
TTC28-208ENST00000612946 PHKG2P15735 406 aa8.8□□□□□ -1
TTC28-208ENST00000612946 FBLN1P23142 703 aa8.8□□□□□ -1
TTC28-208ENST00000612946 ZNF234Q14588 700 aa8.8□□□□□ -1
TTC28-208ENST00000612946 KLHL22Q53GT1 634 aa8.8□□□□□ -1
TTC28-208ENST00000612946 SLFN11Q7Z7L1 901 aa8.8□□□□□ -1
TTC28-208ENST00000612946 ABRAQ8N0Z2 381 aa8.8□□□□□ -1
TTC28-208ENST00000612946 ZSWIM2Q8NEG5 633 aa8.8□□□□□ -1
TTC28-208ENST00000612946 TRPM4Q8TD43 1214 aa8.8□□□□□ -1
TTC28-208ENST00000612946 ISOC1Q96CN7 298 aa8.8□□□□□ -1
TTC28-208ENST00000612946 CCDC32Q9BV29 185 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms