RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 BRSK1Q8TDC3 778 aa28.2■■■□□ 2.1
CSPG5-205ENST00000610462 BLOC1S5Q8TDH9 187 aa28.2■■■□□ 2.1
CSPG5-205ENST00000610462 TRMT2BQ96GJ1 504 aaKnown RBP28.2■■■□□ 2.1
CSPG5-205ENST00000610462 PSKH2Q96QS6 385 aa28.2■■■□□ 2.1
CSPG5-205ENST00000610462 CINPQ9BW66 212 aaPredicted RBP28.2■■■□□ 2.1
CSPG5-205ENST00000610462 ILVBLA1L0T0 632 aa28.19■■■□□ 2.1
CSPG5-205ENST00000610462 MATN2O00339 956 aa28.19■■■□□ 2.1
CSPG5-205ENST00000610462 RHOCP08134 193 aa28.19■■■□□ 2.1
CSPG5-205ENST00000610462 CSHL1Q14406 222 aa28.19■■■□□ 2.1
CSPG5-205ENST00000610462 TAF12Q16514 161 aa28.19■■■□□ 2.1
CSPG5-205ENST00000610462 PDCD6IPQ8WUM4 868 aaKnown RBP28.19■■■□□ 2.1
CSPG5-205ENST00000610462 TBATAQ96M53 351 aa28.19■■■□□ 2.1
CSPG5-205ENST00000610462 TRIB3Q96RU7 358 aa28.19■■■□□ 2.1
CSPG5-205ENST00000610462 ACSS2Q9NR19 701 aa28.19■■■□□ 2.1
CSPG5-205ENST00000610462 MARCH4Q9P2E8 410 aaPredicted RBP28.19■■■□□ 2.1
CSPG5-205ENST00000610462 NDST3O95803 873 aa28.19■■■□□ 2.1
CSPG5-205ENST00000610462 CCR10P46092 362 aa28.19■■■□□ 2.1
CSPG5-205ENST00000610462 SGSHP51688 502 aa28.19■■■□□ 2.1
CSPG5-205ENST00000610462 PLD1Q13393 1074 aa28.19■■■□□ 2.1
CSPG5-205ENST00000610462 RFTN1Q14699 578 aaPredicted RBP28.19■■■□□ 2.1
CSPG5-205ENST00000610462 AGAP9Q5VTM2 703 aa28.19■■■□□ 2.1
CSPG5-205ENST00000610462 METTL21CQ5VZV1 264 aa28.19■■■□□ 2.1
CSPG5-205ENST00000610462 AGR3Q8TD06 166 aa28.19■■■□□ 2.1
CSPG5-205ENST00000610462 KLF16Q9BXK1 252 aaPredicted RBP28.19■■■□□ 2.1
CSPG5-205ENST00000610462 UNKQ9C0B0 810 aaKnown RBP28.19■■■□□ 2.1
CSPG5-205ENST00000610462 RNF38Q9H0F5 515 aa28.19■■■□□ 2.1
CSPG5-205ENST00000610462 RIMKLBQ9ULI2 386 aa28.19■■■□□ 2.1
CSPG5-205ENST00000610462 VWA7Q9Y334 891 aa28.19■■■□□ 2.1
CSPG5-205ENST00000610462 ARL5AQ9Y689 179 aa28.19■■■□□ 2.1
CSPG5-205ENST00000610462 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP28.18■■■□□ 2.1
CSPG5-205ENST00000610462 OR51F1A6NGY5 319 aa28.18■■■□□ 2.1
CSPG5-205ENST00000610462 HDAC3O15379 428 aa28.18■■■□□ 2.1
CSPG5-205ENST00000610462 NCF2P19878 526 aaPredicted RBP28.18■■■□□ 2.1
CSPG5-205ENST00000610462 ILF2Q12905 390 aaKnown RBP28.18■■■□□ 2.1
CSPG5-205ENST00000610462 ZNF177Q13360 481 aaPredicted RBP28.18■■■□□ 2.1
CSPG5-205ENST00000610462 ACCSLQ4AC99 568 aa28.18■■■□□ 2.1
CSPG5-205ENST00000610462 FSCBQ5H9T9 825 aa28.18■■■□□ 2.1
CSPG5-205ENST00000610462 TECRLQ5HYJ1 363 aa28.18■■■□□ 2.1
CSPG5-205ENST00000610462 ADGRF1Q5T601 910 aa28.18■■■□□ 2.1
CSPG5-205ENST00000610462 LSMEM2Q8N112 164 aa28.18■■■□□ 2.1
CSPG5-205ENST00000610462 SCG3Q8WXD2 468 aaKnown RBP28.18■■■□□ 2.1
CSPG5-205ENST00000610462 MCM8Q9UJA3 840 aa28.18■■■□□ 2.1
CSPG5-205ENST00000610462 AGO1Q9UL18 857 aaKnown RBP28.18■■■□□ 2.1
CSPG5-205ENST00000610462 NPHS1O60500 1241 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 LTA4HP09960 611 aaKnown RBP28.17■■■□□ 2.1
CSPG5-205ENST00000610462 TPBGLP0DKB5 382 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 GLDCP23378 1020 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 ATP5F1P24539 256 aaPredicted RBP28.17■■■□□ 2.1
CSPG5-205ENST00000610462 DNAJB13P59910 316 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 MXRA7P84157 204 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 SETD3Q86TU7 594 aaPredicted RBP28.17■■■□□ 2.1
CSPG5-205ENST00000610462 LDB1Q86U70 411 aaPredicted RBP28.17■■■□□ 2.1
CSPG5-205ENST00000610462 GPR150Q8NGU9 434 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 DNAJC1Q96KC8 554 aaKnown RBP28.17■■■□□ 2.1
CSPG5-205ENST00000610462 ZNF558Q96NG5 402 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 HERC2P3Q9BVR0 1158 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 DCLRE1BQ9H816 532 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 A0A1B0GVM2 712 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 TCAF2A6NFQ2 919 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 SLCO1B7G3V0H7 640 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 RPP40O75818 363 aaKnown RBP28.17■■■□□ 2.1
CSPG5-205ENST00000610462 IRF1P10914 325 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 KPNB1Q14974 876 aaKnown RBP28.17■■■□□ 2.1
CSPG5-205ENST00000610462 VEPH1Q14D04 833 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 SEL1L3Q68CR1 1132 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 SLC39A11Q8N1S5 342 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 PNPLA1Q8N8W4 532 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 TXNDC5Q8NBS9 432 aaKnown RBP28.17■■■□□ 2.1
CSPG5-205ENST00000610462 VWCEQ96DN2 955 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 TMEM169Q96HH4 297 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 TACO1Q9BSH4 297 aaKnown RBP28.17■■■□□ 2.1
CSPG5-205ENST00000610462 GPAMQ9HCL2 828 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 MAN1C1Q9NR34 630 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 VTI1BQ9UEU0 232 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 ZDHHC2Q9UIJ5 367 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 C15orf41Q9Y2V0 281 aa28.17■■■□□ 2.1
CSPG5-205ENST00000610462 C2orf78A6NCI8 922 aa28.16■■■□□ 2.1
CSPG5-205ENST00000610462 TM7SF2O76062 418 aa28.16■■■□□ 2.1
CSPG5-205ENST00000610462 GLP2RO95838 553 aa28.16■■■□□ 2.1
CSPG5-205ENST00000610462 GOT2P00505 430 aaKnown RBP28.16■■■□□ 2.1
CSPG5-205ENST00000610462 MNX1P50219 401 aaPredicted RBP28.16■■■□□ 2.1
CSPG5-205ENST00000610462 KHDC1Q4VXA5 237 aaKnown RBP28.16■■■□□ 2.1
CSPG5-205ENST00000610462 STON2Q8WXE9 905 aa28.16■■■□□ 2.1
CSPG5-205ENST00000610462 UBXN10Q96LJ8 280 aa28.16■■■□□ 2.1
CSPG5-205ENST00000610462 SUDS3Q9H7L9 328 aaPredicted RBP28.16■■■□□ 2.1
CSPG5-205ENST00000610462 YY1AP1Q9H869 796 aa28.16■■■□□ 2.1
CSPG5-205ENST00000610462 TCF7L2Q9NQB0 619 aa28.16■■■□□ 2.1
CSPG5-205ENST00000610462 TBC1D30Q9Y2I9 924 aa28.16■■■□□ 2.1
CSPG5-205ENST00000610462 PLXNA4Q9HCM2 1894 aa28.16■■■□□ 2.1
CSPG5-205ENST00000610462 LTBP2Q14767 1821 aa28.16■■■□□ 2.1
CSPG5-205ENST00000610462 CCDC166P0CW27 439 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 GNAZP19086 355 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 TFEBP19484 476 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 CPOXP36551 454 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 RGRP47804 291 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 PPP3CCP48454 512 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 PFKPQ01813 784 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 FAM45BPQ6NSW5 357 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 KLC3Q6P597 504 aa28.15■■■□□ 2.1
CSPG5-205ENST00000610462 SCUBE1Q8IWY4 988 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms