RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 CLCNKBP51801 687 aa20.52■□□□□ 0.88
SSBP3-216ENST00000610401 SLC5A3P53794 718 aa20.52■□□□□ 0.88
SSBP3-216ENST00000610401 STX5Q13190 355 aa20.52■□□□□ 0.88
SSBP3-216ENST00000610401 CHERPQ8IWX8 916 aaKnown RBP20.52■□□□□ 0.88
SSBP3-216ENST00000610401 ZMIZ2Q8NF64 920 aa20.52■□□□□ 0.88
SSBP3-216ENST00000610401 CDCA5Q96FF9 252 aa20.52■□□□□ 0.88
SSBP3-216ENST00000610401 ZNF560Q96MR9 790 aa20.52■□□□□ 0.88
SSBP3-216ENST00000610401 PAIP1Q9H074 479 aaKnown RBP20.52■□□□□ 0.88
SSBP3-216ENST00000610401 PRDM16Q9HAZ2 1276 aa20.52■□□□□ 0.88
SSBP3-216ENST00000610401 NT5MQ9NPB1 228 aa20.52■□□□□ 0.88
SSBP3-216ENST00000610401 VTI1BQ9UEU0 232 aa20.52■□□□□ 0.88
SSBP3-216ENST00000610401 TRAF6Q9Y4K3 522 aa20.52■□□□□ 0.88
SSBP3-216ENST00000610401 NRP2O60462 931 aa20.52■□□□□ 0.88
SSBP3-216ENST00000610401 HLA-DQB2P05538 268 aa20.52■□□□□ 0.88
SSBP3-216ENST00000610401 GRB7Q14451 532 aa20.52■□□□□ 0.88
SSBP3-216ENST00000610401 PCID2Q5JVF3 399 aa20.52■□□□□ 0.88
SSBP3-216ENST00000610401 TRIM74Q86UV6 250 aa20.52■□□□□ 0.88
SSBP3-216ENST00000610401 TRIM73Q86UV7 250 aa20.52■□□□□ 0.88
SSBP3-216ENST00000610401 MAGEE2Q8TD90 523 aaPredicted RBP20.52■□□□□ 0.88
SSBP3-216ENST00000610401 MUC3BQ9H195 1237 aa20.52■□□□□ 0.88
SSBP3-216ENST00000610401 IPPQ9Y573 584 aa20.52■□□□□ 0.88
SSBP3-216ENST00000610401 TRPC5OSA6NMA1 111 aa20.52■□□□□ 0.87
SSBP3-216ENST00000610401 FZD9O00144 591 aa20.52■□□□□ 0.87
SSBP3-216ENST00000610401 RHDQ02161 417 aa20.52■□□□□ 0.87
SSBP3-216ENST00000610401 PFKFB4Q16877 469 aa20.52■□□□□ 0.87
SSBP3-216ENST00000610401 KLC3Q6P597 504 aa20.52■□□□□ 0.87
SSBP3-216ENST00000610401 FASTKD5Q7L8L6 764 aaKnown RBP20.52■□□□□ 0.87
SSBP3-216ENST00000610401 SETD3Q86TU7 594 aaPredicted RBP20.52■□□□□ 0.87
SSBP3-216ENST00000610401 SLC39A8Q9C0K1 460 aa20.52■□□□□ 0.87
SSBP3-216ENST00000610401 SMOXQ9NWM0 555 aa20.52■□□□□ 0.87
SSBP3-216ENST00000610401 OAZ3Q9UMX2 235 aa20.52■□□□□ 0.87
SSBP3-216ENST00000610401 DNAJC25-GNG10A0A024R161 153 aa20.51■□□□□ 0.87
SSBP3-216ENST00000610401 ERI2A8K979 691 aaKnown RBP20.51■□□□□ 0.87
SSBP3-216ENST00000610401 RABL3Q5HYI8 236 aa20.51■□□□□ 0.87
SSBP3-216ENST00000610401 LDLRAP1Q5SW96 308 aa20.51■□□□□ 0.87
SSBP3-216ENST00000610401 PARP8Q8N3A8 854 aa20.51■□□□□ 0.87
SSBP3-216ENST00000610401 FIBCD1Q8N539 461 aa20.51■□□□□ 0.87
SSBP3-216ENST00000610401 TUBGCP3Q96CW5 907 aa20.51■□□□□ 0.87
SSBP3-216ENST00000610401 TMEM209Q96SK2 561 aa20.51■□□□□ 0.87
SSBP3-216ENST00000610401 HNRNPABQ99729 332 aaKnown RBP20.51■□□□□ 0.87
SSBP3-216ENST00000610401 UNC93B1Q9H1C4 597 aa20.51■□□□□ 0.87
SSBP3-216ENST00000610401 SIP14410 1827 aa20.51■□□□□ 0.87
SSBP3-216ENST00000610401 A0A1B0GTL3 188 aa20.51■□□□□ 0.87
SSBP3-216ENST00000610401 AP1G1O43747 822 aa20.51■□□□□ 0.87
SSBP3-216ENST00000610401 TOMM70O94826 608 aa20.51■□□□□ 0.87
SSBP3-216ENST00000610401 APOA4P06727 396 aa20.51■□□□□ 0.87
SSBP3-216ENST00000610401 ATP5F1P24539 256 aaPredicted RBP20.51■□□□□ 0.87
SSBP3-216ENST00000610401 STX1BP61266 288 aa20.51■□□□□ 0.87
SSBP3-216ENST00000610401 SV2CQ496J9 727 aa20.51■□□□□ 0.87
SSBP3-216ENST00000610401 SHCBP1Q8NEM2 672 aa20.51■□□□□ 0.87
SSBP3-216ENST00000610401 TMEM74Q96NL1 305 aa20.51■□□□□ 0.87
SSBP3-216ENST00000610401 UPF3AQ9H1J1 476 aaKnown RBP20.51■□□□□ 0.87
SSBP3-216ENST00000610401 PARP14Q460N5 1801 aa20.51■□□□□ 0.87
SSBP3-216ENST00000610401 TARM1B6A8C7 271 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 XPOTO43592 962 aaKnown RBP20.5■□□□□ 0.87
SSBP3-216ENST00000610401 IPO13O94829 963 aaKnown RBP20.5■□□□□ 0.87
SSBP3-216ENST00000610401 ALDOCP09972 364 aaKnown RBP20.5■□□□□ 0.87
SSBP3-216ENST00000610401 CTBSQ01459 385 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 APOFQ13790 326 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 LRP8Q14114 963 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 POTEHQ6S545 545 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 LINC01465Q8N7H1 131 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 C3orf58Q8NDZ4 430 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 GPR152Q8TDT2 470 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 TRPC4APQ8TEL6 797 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 HAUS8Q9BT25 410 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 C1orf50Q9BV19 199 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 ADAMTS10Q9H324 1103 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 MID1IP1Q9NPA3 183 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 RCOR3Q9P2K3 495 aaPredicted RBP20.5■□□□□ 0.87
SSBP3-216ENST00000610401 A0A0J9YYE9 177 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 A0A1W2PPW3 197 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 F8W810 466 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 J3QRK9 145 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 H2AFYO75367 372 aaKnown RBP20.5■□□□□ 0.87
SSBP3-216ENST00000610401 CD4P01730 458 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 HMBSP08397 361 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 NAA20P61599 178 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 C6orf10Q5SRN2 563 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 MAMDC4Q6UXC1 1216 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 NLGN2Q8NFZ4 835 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 PPTC7Q8NI37 304 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 DDI1Q8WTU0 396 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 DLG3Q92796 817 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 PBXIP1Q96AQ6 731 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 FBXL8Q96CD0 374 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 CYP2S1Q96SQ9 504 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 ZNF385DQ9H6B1 395 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 LTB4R2Q9NPC1 389 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 ASB14A6NK59 587 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 ARSDP51689 593 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 ATP1A4Q13733 1029 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 GPR141Q7Z602 305 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 CPSF7Q8N684 471 aaKnown RBP20.5■□□□□ 0.87
SSBP3-216ENST00000610401 HDAC10Q969S8 669 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 MRPL57Q9BQC6 102 aaKnown RBP20.5■□□□□ 0.87
SSBP3-216ENST00000610401 AKTIPQ9H8T0 292 aa20.5■□□□□ 0.87
SSBP3-216ENST00000610401 SEMA4BQ9NPR2 832 aaPredicted RBP20.5■□□□□ 0.87
SSBP3-216ENST00000610401 MARCH4Q9P2E8 410 aaPredicted RBP20.5■□□□□ 0.87
SSBP3-216ENST00000610401 MAGEB16A2A368 324 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms