RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 IL36AQ9UHA7 158 aa19.46■□□□□ 0.71
SGMS1-208ENST00000608287 CSNK1G3Q9Y6M4 447 aa19.46■□□□□ 0.71
SGMS1-208ENST00000608287 ZSCAN5CA6NGD5 496 aaPredicted RBP19.45■□□□□ 0.7
SGMS1-208ENST00000608287 AKR1B15C9JRZ8 316 aaPredicted RBP19.45■□□□□ 0.7
SGMS1-208ENST00000608287 K7ESM1 405 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 MYO1FO00160 1098 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 BUB1O43683 1085 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 TNFSF15O95150 251 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 GIMD1P0DJR0 217 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 TCF4P15884 667 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 IL1R2P27930 398 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 RPIAP49247 311 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 SERINC3Q13530 473 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 SMTNL2Q2TAL5 461 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 ASTE1Q2TB18 679 aaPredicted RBP19.45■□□□□ 0.7
SGMS1-208ENST00000608287 PARP15Q460N3 678 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 CARD16Q5EG05 197 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 ARSIQ5FYB1 569 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 AGBL4Q5VU57 503 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 FOXR1Q6PIV2 292 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 RFX8Q6ZV50 586 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 UMODL1-AS1Q8N2C9 162 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 ZSCAN1Q8NBB4 408 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 TMIEQ8NEW7 156 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 ZNF564Q8TBZ8 553 aaPredicted RBP19.45■□□□□ 0.7
SGMS1-208ENST00000608287 HSPH1Q92598 858 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 CCDC42Q96M95 316 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 PACSIN1Q9BY11 444 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 RBSNQ9H1K0 784 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 DYRK4Q9NR20 520 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 CTTNBP2NLQ9P2B4 639 aa19.45■□□□□ 0.7
SGMS1-208ENST00000608287 TMX2-CTNND1H3BSU7 103 aa19.44■□□□□ 0.7
SGMS1-208ENST00000608287 LEFTY1O75610 366 aa19.44■□□□□ 0.7
SGMS1-208ENST00000608287 H2AFZP0C0S5 128 aa19.44■□□□□ 0.7
SGMS1-208ENST00000608287 TGM2P21980 687 aa19.44■□□□□ 0.7
SGMS1-208ENST00000608287 SSR1P43307 286 aaKnown RBP19.44■□□□□ 0.7
SGMS1-208ENST00000608287 CCNHP51946 323 aaPredicted RBP19.44■□□□□ 0.7
SGMS1-208ENST00000608287 TBX2Q13207 712 aaPredicted RBP19.44■□□□□ 0.7
SGMS1-208ENST00000608287 UBAP2LQ14157 1087 aaKnown RBP19.44■□□□□ 0.7
SGMS1-208ENST00000608287 BOLA3Q53S33 107 aa19.44■□□□□ 0.7
SGMS1-208ENST00000608287 H2AFVQ71UI9 128 aa19.44■□□□□ 0.7
SGMS1-208ENST00000608287 RYBPQ8N488 228 aaPredicted RBP19.44■□□□□ 0.7
SGMS1-208ENST00000608287 NIPA2Q8N8Q9 360 aa19.44■□□□□ 0.7
SGMS1-208ENST00000608287 NAT6Q93015 286 aa19.44■□□□□ 0.7
SGMS1-208ENST00000608287 ISG20Q96AZ6 181 aaKnown RBP19.44■□□□□ 0.7
SGMS1-208ENST00000608287 CELF6Q96J87 481 aaKnown RBP19.44■□□□□ 0.7
SGMS1-208ENST00000608287 HEPHQ9BQS7 1158 aa19.44■□□□□ 0.7
SGMS1-208ENST00000608287 KLC2Q9H0B6 622 aa19.44■□□□□ 0.7
SGMS1-208ENST00000608287 ZDHHC6Q9H6R6 413 aa19.44■□□□□ 0.7
SGMS1-208ENST00000608287 NHEJ1Q9H9Q4 299 aaPredicted RBP19.44■□□□□ 0.7
SGMS1-208ENST00000608287 WDR70Q9NW82 654 aa19.44■□□□□ 0.7
SGMS1-208ENST00000608287 DNAJC28Q9NX36 388 aa19.44■□□□□ 0.7
SGMS1-208ENST00000608287 SEPT10Q9P0V9 454 aa19.44■□□□□ 0.7
SGMS1-208ENST00000608287 HECAQ9UBI9 543 aaPredicted RBP19.44■□□□□ 0.7
SGMS1-208ENST00000608287 SALL4Q9UJQ4 1053 aa19.44■□□□□ 0.7
SGMS1-208ENST00000608287 PCDHGA7Q9Y5G6 932 aa19.44■□□□□ 0.7
SGMS1-208ENST00000608287 A6NNZ2 444 aa19.43■□□□□ 0.7
SGMS1-208ENST00000608287 SLC31A1O15431 190 aa19.43■□□□□ 0.7
SGMS1-208ENST00000608287 KRT10P13645 584 aa19.43■□□□□ 0.7
SGMS1-208ENST00000608287 ERCC2P18074 760 aa19.43■□□□□ 0.7
SGMS1-208ENST00000608287 ZNF135P52742 658 aaPredicted RBP19.43■□□□□ 0.7
SGMS1-208ENST00000608287 NDST2P52849 883 aa19.43■□□□□ 0.7
SGMS1-208ENST00000608287 LINC00303Q3SY05 128 aa19.43■□□□□ 0.7
SGMS1-208ENST00000608287 EFL1Q7Z2Z2 1120 aaKnown RBP19.43■□□□□ 0.7
SGMS1-208ENST00000608287 ARRDC3Q96B67 414 aa19.43■□□□□ 0.7
SGMS1-208ENST00000608287 PRR11Q96HE9 360 aaPredicted RBP19.43■□□□□ 0.7
SGMS1-208ENST00000608287 PPP1R16AQ96I34 528 aa19.43■□□□□ 0.7
SGMS1-208ENST00000608287 LRRC19Q9H756 370 aa19.43■□□□□ 0.7
SGMS1-208ENST00000608287 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.43■□□□□ 0.7
SGMS1-208ENST00000608287 SPTLC3Q9NUV7 552 aa19.43■□□□□ 0.7
SGMS1-208ENST00000608287 CWC15Q9P013 229 aaKnown RBP19.43■□□□□ 0.7
SGMS1-208ENST00000608287 UVRAGQ9P2Y5 699 aa19.43■□□□□ 0.7
SGMS1-208ENST00000608287 WASF2Q9Y6W5 498 aa19.43■□□□□ 0.7
SGMS1-208ENST00000608287 DOCK9Q9BZ29 2069 aa19.43■□□□□ 0.7
SGMS1-208ENST00000608287 TLN1Q9Y490 2541 aaKnown RBP19.42■□□□□ 0.7
SGMS1-208ENST00000608287 LY6G6EA0A0G2JKS1 128 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 CPED1A4D0V7 1026 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 EME2A4GXA9 379 aaPredicted RBP19.42■□□□□ 0.7
SGMS1-208ENST00000608287 H3BRJ5 948 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 RNF103O00237 685 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 TMCC1O94876 653 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 RARAP10276 462 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 ARL4AP40617 200 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 HCAR3P49019 387 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 SNRPD1P62314 119 aaKnown RBP19.42■□□□□ 0.7
SGMS1-208ENST00000608287 NR0B2Q15466 257 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 DPYSL2Q16555 572 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 CDKN3Q16667 212 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 TXNRD3NBQ6F5E7 133 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 HORMAD1Q86X24 394 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 OR13H1Q8NG92 308 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 OR2AP1Q8NGE2 309 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 OR6K2Q8NGY2 324 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 CASKIN2Q8WXE0 1202 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 SLC39A8Q9C0K1 460 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 ACSL6Q9UKU0 697 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 CA5BQ9Y2D0 317 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 U3KQA8 63 aa19.42■□□□□ 0.7
SGMS1-208ENST00000608287 A0A1W2PQU0 124 aa19.41■□□□□ 0.7
SGMS1-208ENST00000608287 ARHGAP42A6NI28 874 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms