RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	PIGN	O95427	931 aa		21.2	■□□□□ 0.98
NECAB3-222	ENST00000607805	EPHB2	P29323	1055 aa		21.2	■□□□□ 0.98
NECAB3-222	ENST00000607805	SLC5A2	P31639	672 aa		21.2	■□□□□ 0.98
NECAB3-222	ENST00000607805	CCKBR	P32239	447 aa		21.2	■□□□□ 0.98
NECAB3-222	ENST00000607805	UGT1A5	P35504	534 aa		21.2	■□□□□ 0.98
NECAB3-222	ENST00000607805	SOX5	P35711	763 aa		21.2	■□□□□ 0.98
NECAB3-222	ENST00000607805	CCL7	P80098	99 aa		21.2	■□□□□ 0.98
NECAB3-222	ENST00000607805	UGP2	Q16851	508 aa		21.2	■□□□□ 0.98
NECAB3-222	ENST00000607805	PHF13	Q86YI8	300 aa	Predicted RBP	21.2	■□□□□ 0.98
NECAB3-222	ENST00000607805	C3orf20	Q8ND61	904 aa		21.2	■□□□□ 0.98
NECAB3-222	ENST00000607805	GPR156	Q8NFN8	814 aa		21.2	■□□□□ 0.98
NECAB3-222	ENST00000607805	SCG3	Q8WXD2	468 aa	Known RBP	21.2	■□□□□ 0.98
NECAB3-222	ENST00000607805	PDF	Q9HBH1	243 aa		21.2	■□□□□ 0.98
NECAB3-222	ENST00000607805	PCDH12	Q9NPG4	1184 aa		21.2	■□□□□ 0.98
NECAB3-222	ENST00000607805	DOPEY2	Q9Y3R5	2298 aa		21.2	■□□□□ 0.98
NECAB3-222	ENST00000607805	SIGLEC16	A6NMB1	481 aa		21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	BUB1B	O60566	1050 aa	Predicted RBP	21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	GPD1	P21695	349 aa		21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	MMP12	P39900	470 aa		21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	SRP54	P61011	504 aa	Known RBP	21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	INPP5A	Q14642	412 aa		21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	PARP15	Q460N3	678 aa		21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	CT47A1	Q5JQC4	288 aa	Predicted RBP	21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	ENPP7	Q6UWV6	458 aa		21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	RAB11FIP2	Q7L804	512 aa		21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	ZSWIM9	Q86XI8	627 aa		21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	DNAAF5	Q86Y56	855 aa		21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	FBXO39	Q8N4B4	442 aa		21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	EXOC2	Q96KP1	924 aa		21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	GFM1	Q96RP9	751 aa	Known RBP	21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	RBM15	Q96T37	977 aa	Known RBP eCLIP	21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	SUV39H2	Q9H5I1	410 aa		21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	TAB2	Q9NYJ8	693 aa		21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	ADAM22	Q9P0K1	906 aa		21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	SIRPG	Q9P1W8	387 aa		21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	FZD10	Q9ULW2	581 aa		21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	GPR34	Q9UPC5	381 aa		21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	DGKB	Q9Y6T7	804 aa		21.19	■□□□□ 0.98
NECAB3-222	ENST00000607805	TMX2-CTNND1	H3BSU7	103 aa		21.18	■□□□□ 0.98
NECAB3-222	ENST00000607805	CCP110	O43303	1012 aa		21.18	■□□□□ 0.98
NECAB3-222	ENST00000607805	CTSE	P14091	401 aa		21.18	■□□□□ 0.98
NECAB3-222	ENST00000607805	POLR2F	P61218	127 aa	Known RBP	21.18	■□□□□ 0.98
NECAB3-222	ENST00000607805	GRM3	Q14832	879 aa		21.18	■□□□□ 0.98
NECAB3-222	ENST00000607805	CLEC16A	Q2KHT3	1053 aa		21.18	■□□□□ 0.98
NECAB3-222	ENST00000607805	ZSCAN23	Q3MJ62	389 aa		21.18	■□□□□ 0.98
NECAB3-222	ENST00000607805	OGFOD3	Q6PK18	319 aa		21.18	■□□□□ 0.98
NECAB3-222	ENST00000607805	GKN2	Q86XP6	184 aa		21.18	■□□□□ 0.98
NECAB3-222	ENST00000607805	EXD3	Q8N9H8	876 aa		21.18	■□□□□ 0.98
NECAB3-222	ENST00000607805	OR6C4	Q8NGE1	309 aa		21.18	■□□□□ 0.98
NECAB3-222	ENST00000607805	FOXP3	Q9BZS1	431 aa		21.18	■□□□□ 0.98
NECAB3-222	ENST00000607805	LRRN3	Q9H3W5	708 aa		21.18	■□□□□ 0.98
NECAB3-222	ENST00000607805	LRRC19	Q9H756	370 aa		21.18	■□□□□ 0.98
NECAB3-222	ENST00000607805	DACH1	Q9UI36	760 aa		21.18	■□□□□ 0.98
NECAB3-222	ENST00000607805	APPL1	Q9UKG1	709 aa		21.18	■□□□□ 0.98
NECAB3-222	ENST00000607805	DOLK	Q9UPQ8	538 aa		21.18	■□□□□ 0.98
NECAB3-222	ENST00000607805	DAAM1	Q9Y4D1	1078 aa		21.18	■□□□□ 0.98
NECAB3-222	ENST00000607805	OR1A2	Q9Y585	309 aa		21.18	■□□□□ 0.98
NECAB3-222	ENST00000607805	LRRK2	Q5S007	2527 aa		21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	RPLP0	P05388	317 aa	Known RBP	21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	HTR1B	P28222	390 aa		21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	LIG3	P49916	1009 aa		21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	ZNF143	P52747	638 aa	Predicted RBP	21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	INHBC	P55103	352 aa		21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	ZFP36L1	Q07352	338 aa	Known RBP	21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	MTM1	Q13496	603 aa		21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	LINC00303	Q3SY05	128 aa		21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	EFHC2	Q5JST6	749 aa		21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	PPP1R15B	Q5SWA1	713 aa		21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	CDKAL1	Q5VV42	579 aa		21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	MON1B	Q7L1V2	547 aa		21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	ZNF354C	Q86Y25	554 aa		21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	PLA2G15	Q8NCC3	412 aa		21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	PDXP	Q96GD0	296 aa		21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	WDR92	Q96MX6	357 aa		21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	ZNF641	Q96N77	438 aa	Predicted RBP	21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	SELENOO	Q9BVL4	669 aa		21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	SYNDIG1	Q9H7V2	258 aa		21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	EPB41L5	Q9HCM4	733 aa		21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	NLRC4	Q9NPP4	1024 aa		21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	SIK3	Q9Y2K2	1263 aa		21.17	■□□□□ 0.98
NECAB3-222	ENST00000607805	CFAP69	A5D8W1	941 aa		21.16	■□□□□ 0.98
NECAB3-222	ENST00000607805	NVL	O15381	856 aa	Known RBP	21.16	■□□□□ 0.98
NECAB3-222	ENST00000607805	CALB1	P05937	261 aa		21.16	■□□□□ 0.98
NECAB3-222	ENST00000607805	HGF	P14210	728 aa		21.16	■□□□□ 0.98
NECAB3-222	ENST00000607805	GM2A	P17900	193 aa		21.16	■□□□□ 0.98
NECAB3-222	ENST00000607805	NSF	P46459	744 aa	Known RBP	21.16	■□□□□ 0.98
NECAB3-222	ENST00000607805	AIF1	P55008	147 aa		21.16	■□□□□ 0.98
NECAB3-222	ENST00000607805	TCEA2	Q15560	299 aa		21.16	■□□□□ 0.98
NECAB3-222	ENST00000607805	TGIF1	Q15583	401 aa		21.16	■□□□□ 0.98
NECAB3-222	ENST00000607805	BRAT1	Q6PJG6	821 aa		21.16	■□□□□ 0.98
NECAB3-222	ENST00000607805	RD3	Q7Z3Z2	195 aa		21.16	■□□□□ 0.98
NECAB3-222	ENST00000607805	TMEM74	Q96NL1	305 aa		21.16	■□□□□ 0.98
NECAB3-222	ENST00000607805	STRADB	Q9C0K7	418 aa		21.16	■□□□□ 0.98
NECAB3-222	ENST00000607805	VPS16	Q9H269	839 aa		21.16	■□□□□ 0.98
NECAB3-222	ENST00000607805	FAM207A	Q9NSI2	230 aa	Predicted RBP	21.16	■□□□□ 0.98
NECAB3-222	ENST00000607805	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	21.16	■□□□□ 0.98
NECAB3-222	ENST00000607805	UBA2	Q9UBT2	640 aa	Predicted RBP	21.16	■□□□□ 0.98
NECAB3-222	ENST00000607805	KL	Q9UEF7	1012 aa		21.16	■□□□□ 0.98
NECAB3-222	ENST00000607805	ATP8A1	Q9Y2Q0	1164 aa		21.16	■□□□□ 0.98
NECAB3-222	ENST00000607805	TMEM202	A6NGA9	273 aa		21.15	■□□□□ 0.98

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms