RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 ARHGAP12Q8IWW6 846 aa7.68□□□□□ -1.18
CUX1-219ENST00000606749 SPACA3Q8IXA5 215 aa7.68□□□□□ -1.18
CUX1-219ENST00000606749 SLC35F3Q8IY50 421 aa7.68□□□□□ -1.18
CUX1-219ENST00000606749 LSMEM2Q8N112 164 aa7.68□□□□□ -1.18
CUX1-219ENST00000606749 TPCN2Q8NHX9 752 aa7.68□□□□□ -1.18
CUX1-219ENST00000606749 FNIP1Q8TF40 1166 aa7.68□□□□□ -1.18
CUX1-219ENST00000606749 GLMNQ92990 594 aa7.68□□□□□ -1.18
CUX1-219ENST00000606749 TSACCQ96A04 125 aaPredicted RBP7.68□□□□□ -1.18
CUX1-219ENST00000606749 GRAMD1AQ96CP6 724 aa7.68□□□□□ -1.18
CUX1-219ENST00000606749 HIC2Q96JB3 615 aa7.68□□□□□ -1.18
CUX1-219ENST00000606749 ZNF578Q96N58 590 aaPredicted RBP7.68□□□□□ -1.18
CUX1-219ENST00000606749 UBL7Q96S82 380 aaPredicted RBP7.68□□□□□ -1.18
CUX1-219ENST00000606749 KCTD15Q96SI1 283 aaPredicted RBP7.68□□□□□ -1.18
CUX1-219ENST00000606749 APOOQ9BUR5 198 aa7.68□□□□□ -1.18
CUX1-219ENST00000606749 SNRNP25Q9BV90 132 aaKnown RBP7.68□□□□□ -1.18
CUX1-219ENST00000606749 LRRC61Q9BV99 259 aa7.68□□□□□ -1.18
CUX1-219ENST00000606749 POLR1BQ9H9Y6 1135 aa7.68□□□□□ -1.18
CUX1-219ENST00000606749 CWC15Q9P013 229 aaKnown RBP7.68□□□□□ -1.18
CUX1-219ENST00000606749 PADI4Q9UM07 663 aa7.68□□□□□ -1.18
CUX1-219ENST00000606749 ZFYVE26Q68DK2 2539 aa7.68□□□□□ -1.18
CUX1-219ENST00000606749 A0A1B0GTH6 734 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 A0A1W2PNU3 283 aaPredicted RBP7.67□□□□□ -1.18
CUX1-219ENST00000606749 A0A1W2PQC6 194 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 DFFAO00273 331 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 TRAFD1O14545 582 aaPredicted RBP7.67□□□□□ -1.18
CUX1-219ENST00000606749 CASC3O15234 703 aaKnown RBP7.67□□□□□ -1.18
CUX1-219ENST00000606749 PRKCGP05129 697 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 CELA2BP08218 269 aaPredicted RBP7.67□□□□□ -1.18
CUX1-219ENST00000606749 ALPIP09923 528 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 SKILP12757 684 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 CTSEP14091 401 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 HTR1BP28222 390 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 MMP12P39900 470 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 PRKCIP41743 596 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 SCNN1BP51168 640 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 ZNF135P52742 658 aaPredicted RBP7.67□□□□□ -1.18
CUX1-219ENST00000606749 ERVPABLB-1P60509 514 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 SRP54P61011 504 aaKnown RBP7.67□□□□□ -1.18
CUX1-219ENST00000606749 TLE3Q04726 772 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 IL10RBQ08334 325 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 KLHL30Q0D2K2 578 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 DPYSQ14117 519 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 RFTN1Q14699 578 aaPredicted RBP7.67□□□□□ -1.18
CUX1-219ENST00000606749 NFATC4Q14934 902 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 NR1I3Q14994 352 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 ELOCQ15369 112 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 ALG11Q2TAA5 492 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 FILIP1LQ4L180 1135 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 PPP6R3Q5H9R7 873 aaPredicted RBP7.67□□□□□ -1.18
CUX1-219ENST00000606749 CFAP58Q5T655 872 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 E4F1Q66K89 784 aaPredicted RBP7.67□□□□□ -1.18
CUX1-219ENST00000606749 ESRP1Q6NXG1 681 aaKnown RBP7.67□□□□□ -1.18
CUX1-219ENST00000606749 ERAP2Q6P179 960 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 CRTC1Q6UUV9 634 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 ENPP7Q6UWV6 458 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 LIPIQ6XZB0 460 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 RBM44Q6ZP01 1051 aaKnown RBP7.67□□□□□ -1.18
CUX1-219ENST00000606749 NYAP1Q6ZVC0 841 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 RD3Q7Z3Z2 195 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 HID1Q8IV36 788 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 TP53INP2Q8IXH6 220 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 SDR16C5Q8N3Y7 309 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 FSTL5Q8N475 847 aaPredicted RBP7.67□□□□□ -1.18
CUX1-219ENST00000606749 NPWQ8N729 165 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 PLA2G15Q8NCC3 412 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 ZNF248Q8NDW4 579 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 NAT6Q93015 286 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 ECHDC3Q96DC8 303 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 ATXN7L3BQ96GX2 97 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 PRR11Q96HE9 360 aaPredicted RBP7.67□□□□□ -1.18
CUX1-219ENST00000606749 NAF1Q96HR8 494 aaKnown RBP7.67□□□□□ -1.18
CUX1-219ENST00000606749 NSMCE3Q96MG7 304 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 SLC46A1Q96NT5 459 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 EDEM3Q9BZQ6 932 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 ISCUQ9H1K1 167 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 ATP13A3Q9H7F0 1226 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 ASCL3Q9NQ33 180 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 MYO1AQ9UBC5 1043 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 GULP1Q9UBP9 304 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 CNOT8Q9UFF9 292 aaKnown RBP7.67□□□□□ -1.18
CUX1-219ENST00000606749 DOLKQ9UPQ8 538 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 SATB2Q9UPW6 733 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 ATP8A1Q9Y2Q0 1164 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 OR1A2Q9Y585 309 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 ENTPD2Q9Y5L3 495 aa7.67□□□□□ -1.18
CUX1-219ENST00000606749 SHROOM3Q8TF72 1996 aa7.66□□□□□ -1.18
CUX1-219ENST00000606749 TTC24A2A3L6 582 aaPredicted RBP7.66□□□□□ -1.18
CUX1-219ENST00000606749 EIF4E1BA6NMX2 242 aaKnown RBP7.66□□□□□ -1.18
CUX1-219ENST00000606749 A8MX80 341 aa7.66□□□□□ -1.18
CUX1-219ENST00000606749 TK2O00142 265 aa7.66□□□□□ -1.18
CUX1-219ENST00000606749 NTN3O00634 580 aaPredicted RBP7.66□□□□□ -1.18
CUX1-219ENST00000606749 ATXN7O15265 892 aaPredicted RBP7.66□□□□□ -1.18
CUX1-219ENST00000606749 LRCH4O75427 683 aa7.66□□□□□ -1.18
CUX1-219ENST00000606749 TCEA3O75764 348 aa7.66□□□□□ -1.18
CUX1-219ENST00000606749 RECQL5O94762 991 aaPredicted RBP7.66□□□□□ -1.18
CUX1-219ENST00000606749 RASGRP1O95267 797 aa7.66□□□□□ -1.18
CUX1-219ENST00000606749 TNFP01375 233 aa7.66□□□□□ -1.18
CUX1-219ENST00000606749 PCCBP05166 539 aa7.66□□□□□ -1.18
CUX1-219ENST00000606749 MYBL1P10243 752 aa7.66□□□□□ -1.18
CUX1-219ENST00000606749 GM2AP17900 193 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms