RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 LCA5Q86VQ0 697 aa22.39■■□□□ 1.18
PPFIA3-211ENST00000602848 ZC3HC1Q86WB0 502 aaKnown RBP22.39■■□□□ 1.18
PPFIA3-211ENST00000602848 DCLK2Q8N568 766 aa22.39■■□□□ 1.18
PPFIA3-211ENST00000602848 BLOC1S5Q8TDH9 187 aa22.39■■□□□ 1.18
PPFIA3-211ENST00000602848 OSCP1Q8WVF1 389 aa22.39■■□□□ 1.18
PPFIA3-211ENST00000602848 SMARCD2Q92925 531 aa22.39■■□□□ 1.18
PPFIA3-211ENST00000602848 VPS39Q96JC1 886 aa22.39■■□□□ 1.18
PPFIA3-211ENST00000602848 PAIP2Q9BPZ3 127 aaKnown RBP22.39■■□□□ 1.18
PPFIA3-211ENST00000602848 C19orf43Q9BQ61 176 aa22.39■■□□□ 1.18
PPFIA3-211ENST00000602848 MLXIPLQ9NP71 852 aa22.39■■□□□ 1.18
PPFIA3-211ENST00000602848 DUS2Q9NX74 493 aaKnown RBP22.39■■□□□ 1.18
PPFIA3-211ENST00000602848 FBXO10Q9UK96 956 aa22.39■■□□□ 1.18
PPFIA3-211ENST00000602848 FBXO5Q9UKT4 447 aa22.39■■□□□ 1.18
PPFIA3-211ENST00000602848 PCDHGC4Q9Y5F7 938 aa22.39■■□□□ 1.18
PPFIA3-211ENST00000602848 CCDC78A2IDD5 438 aa22.39■■□□□ 1.17
PPFIA3-211ENST00000602848 EPOPA6NHQ4 379 aa22.39■■□□□ 1.17
PPFIA3-211ENST00000602848 C2orf81A6NN90 581 aa22.39■■□□□ 1.17
PPFIA3-211ENST00000602848 TPP1O14773 563 aa22.39■■□□□ 1.17
PPFIA3-211ENST00000602848 GLRA3O75311 464 aa22.39■■□□□ 1.17
PPFIA3-211ENST00000602848 GSRP00390 522 aa22.39■■□□□ 1.17
PPFIA3-211ENST00000602848 VIMP08670 466 aaKnown RBP22.39■■□□□ 1.17
PPFIA3-211ENST00000602848 VASPP50552 380 aaPredicted RBP22.39■■□□□ 1.17
PPFIA3-211ENST00000602848 SNRPD1P62314 119 aaKnown RBP22.39■■□□□ 1.17
PPFIA3-211ENST00000602848 TRAF2Q12933 501 aa22.39■■□□□ 1.17
PPFIA3-211ENST00000602848 NPAS3Q8IXF0 933 aa22.39■■□□□ 1.17
PPFIA3-211ENST00000602848 PLPP6Q8IY26 295 aa22.39■■□□□ 1.17
PPFIA3-211ENST00000602848 EFHBQ8N7U6 833 aa22.39■■□□□ 1.17
PPFIA3-211ENST00000602848 GPR150Q8NGU9 434 aa22.39■■□□□ 1.17
PPFIA3-211ENST00000602848 NSUN3Q9H649 340 aaKnown RBP22.39■■□□□ 1.17
PPFIA3-211ENST00000602848 WNT6Q9Y6F9 365 aa22.39■■□□□ 1.17
PPFIA3-211ENST00000602848 MYLKQ15746 1914 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 TMEM265A0A087WTH1 108 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 RPP40O75818 363 aaKnown RBP22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 ADH1CP00326 375 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 AHSGP02765 367 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 GRIA4P48058 902 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 PRAMEP78395 509 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 DMTNQ08495 405 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 DBN1Q16643 649 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 ZSCAN26Q16670 478 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 FUT11Q495W5 492 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 RARS2Q5T160 578 aaKnown RBP22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 ARMC12Q5T9G4 340 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 LRRC34Q8IZ02 419 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 AHI1Q8N157 1196 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 PCDH20Q8N6Y1 951 aaKnown RBP22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 LPCAT1Q8NF37 534 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 OR2AP1Q8NGE2 309 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 BPIFB1Q8TDL5 484 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 E2F7Q96AV8 911 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 ASB16Q96NS5 453 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 TUBGCP5Q96RT8 1024 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 ZNF576Q9H609 170 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 PCMTD2Q9NV79 361 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 NLE1Q9NVX2 485 aaPredicted RBP22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 SLC17A7Q9P2U7 560 aa22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 MTO1Q9Y2Z2 717 aaKnown RBP22.38■■□□□ 1.17
PPFIA3-211ENST00000602848 TCP11X1B4DZS4 312 aa22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 K7ERQ8 282 aa22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 HOXC11O43248 304 aaPredicted RBP22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 HTRA2O43464 458 aaPredicted RBP22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 SMAD6O43541 496 aaKnown RBP22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 SRCP12931 536 aa22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 HOXB8P17481 243 aaPredicted RBP22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 LEPRP48357 1165 aaKnown RBP22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 ECT2LQ008S8 904 aa22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 BCL2L1Q07817 233 aa22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 PDE1CQ14123 709 aaPredicted RBP22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 GRM3Q14832 879 aa22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 DHCR24Q15392 516 aa22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 QPCTQ16769 361 aa22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 ASTLQ6HA08 431 aaPredicted RBP22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 RNF135Q8IUD6 432 aa22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 TRIM42Q8IWZ5 723 aa22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 HDAC10Q969S8 669 aa22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 SLC13A1Q9BZW2 595 aa22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 ATP13A3Q9H7F0 1226 aa22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 SNX15Q9NRS6 342 aa22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 ANKRD6Q9Y2G4 727 aa22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 MYO7AQ13402 2215 aa22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 SZT2Q5T011 3432 aa22.37■■□□□ 1.17
PPFIA3-211ENST00000602848 PGLSO95336 258 aa22.36■■□□□ 1.17
PPFIA3-211ENST00000602848 PDHA1P08559 390 aa22.36■■□□□ 1.17
PPFIA3-211ENST00000602848 TAC1P20366 129 aa22.36■■□□□ 1.17
PPFIA3-211ENST00000602848 CD151P48509 253 aa22.36■■□□□ 1.17
PPFIA3-211ENST00000602848 FAM78AQ5JUQ0 283 aa22.36■■□□□ 1.17
PPFIA3-211ENST00000602848 ATXN7L2Q5T6C5 722 aaPredicted RBP22.36■■□□□ 1.17
PPFIA3-211ENST00000602848 GKAP1Q5VSY0 366 aaPredicted RBP22.36■■□□□ 1.17
PPFIA3-211ENST00000602848 ZNF470Q6ECI4 717 aa22.36■■□□□ 1.17
PPFIA3-211ENST00000602848 ANKRD54Q6NXT1 300 aa22.36■■□□□ 1.17
PPFIA3-211ENST00000602848 SPATS2Q86XZ4 545 aaKnown RBP22.36■■□□□ 1.17
PPFIA3-211ENST00000602848 LRRC8CQ8TDW0 803 aa22.36■■□□□ 1.17
PPFIA3-211ENST00000602848 WFIKKN2Q8TEU8 576 aa22.36■■□□□ 1.17
PPFIA3-211ENST00000602848 FGF13Q92913 245 aa22.36■■□□□ 1.17
PPFIA3-211ENST00000602848 GRAMD1AQ96CP6 724 aa22.36■■□□□ 1.17
PPFIA3-211ENST00000602848 IGFLR1Q9H665 355 aa22.36■■□□□ 1.17
PPFIA3-211ENST00000602848 MAGEE1Q9HCI5 957 aa22.36■■□□□ 1.17
PPFIA3-211ENST00000602848 GGT7Q9UJ14 662 aa22.36■■□□□ 1.17
PPFIA3-211ENST00000602848 A0A1W2PQ67 120 aa22.35■■□□□ 1.17
PPFIA3-211ENST00000602848 GOLGA8TH3BQL2 631 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms