RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 FZD10Q9ULW2 581 aa17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 PCDHGA7Q9Y5G6 932 aa17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 DGKBQ9Y6T7 804 aa17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 CHD5Q8TDI0 1954 aa17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 COL6A6A6NMZ7 2263 aa17.98■□□□□ 0.47
SHKBP1-227ENST00000602011 CREB3O43889 395 aa17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 TNFSF15O95150 251 aa17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 TNFP01375 233 aa17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 PNLIPP16233 465 aa17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 ZNF135P52742 658 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 NSUN2Q08J23 767 aaKnown RBP eCLIP17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 MTM1Q13496 603 aa17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 CYTH1Q15438 398 aa17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 WSCD2Q2TBF2 565 aa17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 PERM1Q5SV97 790 aa17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 DCUN1D2Q6PH85 259 aa17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 LEKR1Q6ZMV7 388 aa17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 PHLDB2Q86SQ0 1253 aa17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 PCMTD1Q96MG8 357 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 PCDHB18PQ96TA0 734 aa17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 WRAP53Q9BUR4 548 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 APOOQ9BUR5 198 aa17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 TCEAL2Q9H3H9 227 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 GULP1Q9UBP9 304 aa17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 SIK3Q9Y2K2 1263 aa17.97■□□□□ 0.47
SHKBP1-227ENST00000602011 FAM170AA1A519 330 aa17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 ARHGAP42A6NI28 874 aa17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 PDE2AO00408 941 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 TNFRSF10CO14798 259 aa17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 SRP54P61011 504 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 RFTN1Q14699 578 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 IRF4Q15306 451 aa17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 TMCO4Q5TGY1 634 aa17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 ENPP7Q6UWV6 458 aa17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 CCDC81Q6ZN84 652 aa17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 MON1BQ7L1V2 547 aa17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 HID1Q8IV36 788 aa17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 WDR92Q96MX6 357 aa17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 GFM1Q96RP9 751 aaKnown RBP17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 AGPAT1Q99943 283 aa17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 MAGEB5Q9BZ81 275 aa17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 ATP13A3Q9H7F0 1226 aa17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 PCDH12Q9NPG4 1184 aa17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 LHX3Q9UBR4 397 aa17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 ACSL6Q9UKU0 697 aa17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 GPR34Q9UPC5 381 aa17.96■□□□□ 0.47
SHKBP1-227ENST00000602011 COL27A1Q8IZC6 1860 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 A0A1W2PQ67 120 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 TCRBV5S1A1TA0A578 114 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 PLD2O14939 933 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 ZW10O43264 779 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 CCP110O43303 1012 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 PRAMEF11O60813 436 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 C6P13671 934 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 NFKBIAP25963 317 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 SERPINA4P29622 427 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 CCKBRP32239 447 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 LIG3P49916 1009 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 TPI1P60174 286 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 INPP5AQ14642 412 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 ALG11Q2TAA5 492 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 KIAA1614Q5VZ46 1190 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 ACAD10Q6JQN1 1059 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 OGFOD3Q6PK18 319 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 PSTKQ8IV42 348 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 PYROXD2Q8N2H3 581 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 FBXO39Q8N4B4 442 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 TTC9Q92623 222 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 ERGIC2Q96RQ1 377 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 CCNL2Q96S94 520 aaPredicted RBP17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 RBM15Q96T37 977 aaKnown RBP eCLIP17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 LRRC19Q9H756 370 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 SEPT11Q9NVA2 429 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 KLQ9UEF7 1012 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 LIMA1Q9UHB6 759 aaKnown RBP17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 APPL1Q9UKG1 709 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 ATP8A1Q9Y2Q0 1164 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 MYO18BQ8IUG5 2567 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 MAST4O15021 2626 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 KIF26BQ2KJY2 2108 aa17.95■□□□□ 0.46
SHKBP1-227ENST00000602011 PIEZO2Q9H5I5 2752 aa17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 CACNB4O00305 520 aaPredicted RBP17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 GJB6O95452 261 aa17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 GLB1P16278 677 aa17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 FERP16591 822 aa17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 KLK7P49862 253 aa17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 RENBPP51606 427 aa17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 COPB1P53618 953 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 TSR1Q2NL82 804 aaKnown RBP17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 PPP1R15BQ5SWA1 713 aa17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 FOXR1Q6PIV2 292 aa17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 CLEC17AQ6ZS10 378 aa17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 RAB11FIP2Q7L804 512 aa17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 MED8Q96G25 268 aa17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 B3GNT4Q9C0J1 378 aa17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 KLC2Q9H0B6 622 aa17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 PDFQ9HBH1 243 aa17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 PARVAQ9NVD7 372 aa17.94■□□□□ 0.46
SHKBP1-227ENST00000602011 FANCLQ9NW38 375 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms