RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 DNAAF3Q8N9W5 541 aa20.59■□□□□ 0.89
PNKP-215ENST00000600910 MCUQ8NE86 351 aa20.59■□□□□ 0.89
PNKP-215ENST00000600910 RPL26L1Q9UNX3 145 aaKnown RBP20.59■□□□□ 0.89
PNKP-215ENST00000600910 FGF1P05230 155 aa20.58■□□□□ 0.89
PNKP-215ENST00000600910 C7P10643 843 aa20.58■□□□□ 0.89
PNKP-215ENST00000600910 DRD3P35462 400 aa20.58■□□□□ 0.89
PNKP-215ENST00000600910 GRIA4P48058 902 aa20.58■□□□□ 0.89
PNKP-215ENST00000600910 POLR2LP62875 67 aaKnown RBP20.58■□□□□ 0.89
PNKP-215ENST00000600910 CDH17Q12864 832 aa20.58■□□□□ 0.89
PNKP-215ENST00000600910 QPCTQ16769 361 aa20.58■□□□□ 0.89
PNKP-215ENST00000600910 UGP2Q16851 508 aa20.58■□□□□ 0.89
PNKP-215ENST00000600910 LRRC73Q5JTD7 316 aa20.58■□□□□ 0.89
PNKP-215ENST00000600910 ANO7Q6IWH7 933 aa20.58■□□□□ 0.89
PNKP-215ENST00000600910 ZDHHC24Q6UX98 284 aa20.58■□□□□ 0.89
PNKP-215ENST00000600910 KIAA1324Q6UXG2 1013 aaKnown RBP20.58■□□□□ 0.89
PNKP-215ENST00000600910 FBXO25Q8TCJ0 367 aa20.58■□□□□ 0.89
PNKP-215ENST00000600910 SERPINB12Q96P63 405 aa20.58■□□□□ 0.89
PNKP-215ENST00000600910 PABPC3Q9H361 631 aaKnown RBP20.58■□□□□ 0.89
PNKP-215ENST00000600910 EPHX3Q9H6B9 360 aa20.58■□□□□ 0.89
PNKP-215ENST00000600910 ARNT2Q9HBZ2 717 aa20.58■□□□□ 0.89
PNKP-215ENST00000600910 CASS4Q9NQ75 786 aa20.58■□□□□ 0.89
PNKP-215ENST00000600910 BCCIPQ9P287 314 aaKnown RBP eCLIP20.58■□□□□ 0.89
PNKP-215ENST00000600910 PHTF1Q9UMS5 762 aa20.58■□□□□ 0.89
PNKP-215ENST00000600910 TNFRSF10AO00220 468 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 ALDH1A2O94788 518 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 PRKCGP05129 697 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 TIMP2P16035 220 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 CTPS1P17812 591 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 CXCL12P48061 93 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 CARSP49589 748 aaKnown RBP20.57■□□□□ 0.88
PNKP-215ENST00000600910 CAV1Q03135 178 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 ZBTB16Q05516 673 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 CNTN1Q12860 1018 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 MTM1Q13496 603 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 LRRC8BQ6P9F7 803 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 FBXL19Q6PCT2 694 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 ERN2Q76MJ5 926 aaKnown RBP20.57■□□□□ 0.88
PNKP-215ENST00000600910 TTC7BQ86TV6 843 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 CAND1Q86VP6 1230 aaKnown RBP20.57■□□□□ 0.88
PNKP-215ENST00000600910 PGBD3Q8N328 593 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 MDGA1Q8NFP4 955 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 PWWP2AQ96N64 755 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 SMIM14Q96QK8 99 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 HDAC8Q9BY41 377 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 ZDHHC18Q9NUE0 388 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 SERGEFQ9UGK8 458 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 SCML1Q9UN30 329 aa20.57■□□□□ 0.88
PNKP-215ENST00000600910 A0A0J9YYE9 177 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 A0A1W2PP55 124 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 UPK3BL1B0FP48 263 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 UPK3BL2E5RIL1 263 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 AVILO75366 819 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 TRBC1P01850 177 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 ALPIP09923 528 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 ACADMP11310 421 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 P2RY2P41231 377 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 CCR3P51677 355 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 NEK3P51956 506 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 CUL1Q13616 776 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 HLTFQ14527 1009 aaKnown RBP eCLIP20.56■□□□□ 0.88
PNKP-215ENST00000600910 NAA30Q147X3 362 aaPredicted RBP20.56■□□□□ 0.88
PNKP-215ENST00000600910 PTPRRQ15256 657 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 TTC31Q49AM3 519 aaPredicted RBP20.56■□□□□ 0.88
PNKP-215ENST00000600910 HDDC3Q8N4P3 179 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 OMDQ99983 421 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 NEUROG2Q9H2A3 272 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 XAB2Q9HCS7 855 aaKnown RBP20.56■□□□□ 0.88
PNKP-215ENST00000600910 SPATA6Q9NWH7 488 aaPredicted RBP20.56■□□□□ 0.88
PNKP-215ENST00000600910 FBXL12Q9NXK8 326 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 RNASEH2AO75792 299 aaKnown RBP20.56■□□□□ 0.88
PNKP-215ENST00000600910 APBB3O95704 486 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 PIRTP0C851 137 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 ADRB3P13945 408 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 TPH1P17752 444 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 XPAP23025 273 aaPredicted RBP20.56■□□□□ 0.88
PNKP-215ENST00000600910 SESN2P58004 480 aaPredicted RBP20.56■□□□□ 0.88
PNKP-215ENST00000600910 MAMSTRQ6ZN01 415 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 NDUFAF2Q8N183 169 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 TMEM105Q8N8V8 129 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 GANCQ8TET4 914 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 COL25A1Q9BXS0 654 aaPredicted RBP20.56■□□□□ 0.88
PNKP-215ENST00000600910 PPIL1Q9Y3C6 166 aa20.56■□□□□ 0.88
PNKP-215ENST00000600910 AP3B1O00203 1094 aa20.55■□□□□ 0.88
PNKP-215ENST00000600910 MLNP12872 115 aa20.55■□□□□ 0.88
PNKP-215ENST00000600910 ECHS1P30084 290 aa20.55■□□□□ 0.88
PNKP-215ENST00000600910 ABL2P42684 1182 aa20.55■□□□□ 0.88
PNKP-215ENST00000600910 FNBP1LQ5T0N5 605 aa20.55■□□□□ 0.88
PNKP-215ENST00000600910 PIP5KL1Q5T9C9 394 aa20.55■□□□□ 0.88
PNKP-215ENST00000600910 AGBL4Q5VU57 503 aa20.55■□□□□ 0.88
PNKP-215ENST00000600910 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.55■□□□□ 0.88
PNKP-215ENST00000600910 USP45Q70EL2 814 aa20.55■□□□□ 0.88
PNKP-215ENST00000600910 BMP8AQ7Z5Y6 402 aa20.55■□□□□ 0.88
PNKP-215ENST00000600910 ZCCHC9Q8N567 271 aaKnown RBP20.55■□□□□ 0.88
PNKP-215ENST00000600910 CAMKK1Q8N5S9 505 aa20.55■□□□□ 0.88
PNKP-215ENST00000600910 RUBCNQ92622 972 aa20.55■□□□□ 0.88
PNKP-215ENST00000600910 SCRN2Q96FV2 425 aa20.55■□□□□ 0.88
PNKP-215ENST00000600910 FRMD8Q9BZ67 464 aaPredicted RBP20.55■□□□□ 0.88
PNKP-215ENST00000600910 FAM129AQ9BZQ8 928 aa20.55■□□□□ 0.88
PNKP-215ENST00000600910 PCDH12Q9NPG4 1184 aa20.55■□□□□ 0.88
PNKP-215ENST00000600910 CD93Q9NPY3 652 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms