RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 USP7Q93009 1102 aa6.17□□□□□ -1.42
VRK3-220ENST00000600259 ARHGEF26Q96DR7 871 aa6.17□□□□□ -1.42
VRK3-220ENST00000600259 NSMCE3Q96MG7 304 aa6.17□□□□□ -1.42
VRK3-220ENST00000600259 TMEM74Q96NL1 305 aa6.17□□□□□ -1.42
VRK3-220ENST00000600259 GFM1Q96RP9 751 aaKnown RBP6.17□□□□□ -1.42
VRK3-220ENST00000600259 WRAP53Q9BUR4 548 aaKnown RBP6.17□□□□□ -1.42
VRK3-220ENST00000600259 SLC12A9Q9BXP2 914 aa6.17□□□□□ -1.42
VRK3-220ENST00000600259 OSBPL1AQ9BXW6 950 aa6.17□□□□□ -1.42
VRK3-220ENST00000600259 FAM117AQ9C073 453 aa6.17□□□□□ -1.42
VRK3-220ENST00000600259 B3GNT4Q9C0J1 378 aa6.17□□□□□ -1.42
VRK3-220ENST00000600259 SYNCQ9H7C4 482 aa6.17□□□□□ -1.42
VRK3-220ENST00000600259 EPB41L5Q9HCM4 733 aa6.17□□□□□ -1.42
VRK3-220ENST00000600259 GEMIN8Q9NWZ8 242 aaKnown RBP6.17□□□□□ -1.42
VRK3-220ENST00000600259 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.17□□□□□ -1.42
VRK3-220ENST00000600259 FOXJ2Q9P0K8 574 aa6.17□□□□□ -1.42
VRK3-220ENST00000600259 SIRPGQ9P1W8 387 aa6.17□□□□□ -1.42
VRK3-220ENST00000600259 LHX3Q9UBR4 397 aa6.17□□□□□ -1.42
VRK3-220ENST00000600259 PISDQ9UG56 409 aa6.17□□□□□ -1.42
VRK3-220ENST00000600259 RWDD2AQ9UIY3 292 aa6.17□□□□□ -1.42
VRK3-220ENST00000600259 GPR34Q9UPC5 381 aa6.17□□□□□ -1.42
VRK3-220ENST00000600259 LOXL2Q9Y4K0 774 aa6.17□□□□□ -1.42
VRK3-220ENST00000600259 DGKBQ9Y6T7 804 aa6.17□□□□□ -1.42
VRK3-220ENST00000600259 CHD5Q8TDI0 1954 aa6.17□□□□□ -1.42
VRK3-220ENST00000600259 UTP20O75691 2785 aaKnown RBP6.16□□□□□ -1.42
VRK3-220ENST00000600259 GOLGA6L4A6NEF3 574 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 C2CD4BA6NLJ0 364 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 WASH4PA8MWX3 477 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 GOLGA8SH3BPF8 625 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 RAMP2O60895 175 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 FUCA1P04066 466 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 CYP1A1P04798 512 aaPredicted RBP6.16□□□□□ -1.42
VRK3-220ENST00000600259 MMEP08473 750 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 PLEKP08567 350 aaPredicted RBP6.16□□□□□ -1.42
VRK3-220ENST00000600259 HOXC4P09017 264 aaPredicted RBP6.16□□□□□ -1.42
VRK3-220ENST00000600259 SFTPCP11686 197 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 CCL4P13236 92 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 CTSEP14091 401 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 GLB1P16278 677 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 CHRNB2P17787 502 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 MMP8P22894 467 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 ETFBP38117 255 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 PTPN9P43378 593 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 SUOXP51687 545 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 HDAC4P56524 1084 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 GEMIN4P57678 1058 aaKnown RBP6.16□□□□□ -1.42
VRK3-220ENST00000600259 ATP11AP98196 1134 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 SERINC3Q13530 473 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 C16orf72Q14CZ0 275 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 POLD3Q15054 466 aaPredicted RBP6.16□□□□□ -1.42
VRK3-220ENST00000600259 TCEA2Q15560 299 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 UGP2Q16851 508 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 KLHDC7AQ5VTJ3 777 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 STRADAQ7RTN6 431 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 SPRED1Q7Z699 444 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 GKN2Q86XP6 184 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 NRROSQ86YC3 692 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 JAMLQ86YT9 394 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 CCNJLQ8IV13 435 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 PYROXD2Q8N2H3 581 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 PELI3Q8N2H9 469 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 CBARPQ8N350 705 aaPredicted RBP6.16□□□□□ -1.42
VRK3-220ENST00000600259 RYBPQ8N488 228 aaPredicted RBP6.16□□□□□ -1.42
VRK3-220ENST00000600259 CCDC185Q8N715 623 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 Q8N9G6 341 aaPredicted RBP6.16□□□□□ -1.42
VRK3-220ENST00000600259 CCL4L1Q8NHW4 92 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 GPT2Q8TD30 523 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 CXorf40AQ8TE69 158 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 SCG3Q8WXD2 468 aaKnown RBP6.16□□□□□ -1.42
VRK3-220ENST00000600259 CASKIN2Q8WXE0 1202 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 NKD1Q969G9 470 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 TMEM159Q96B96 161 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 HMCESQ96FZ2 354 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 PDXPQ96GD0 296 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 C1QTNF7Q9BXJ2 289 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 SPRY4Q9C004 299 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 STRADBQ9C0K7 418 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 TMEM168Q9H0V1 697 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 SEMA6CQ9H3T2 930 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 SUV39H2Q9H5I1 410 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 FGF22Q9HCT0 170 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 PCDH12Q9NPG4 1184 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 KIAA1468Q9P260 1216 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 NOCTQ9UK39 431 aaKnown RBP6.16□□□□□ -1.42
VRK3-220ENST00000600259 OR1A2Q9Y585 309 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 HEMK1Q9Y5R4 338 aaPredicted RBP6.16□□□□□ -1.42
VRK3-220ENST00000600259 ST14Q9Y5Y6 855 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 FHOD1Q9Y613 1164 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 RNF215Q9Y6U7 377 aa6.16□□□□□ -1.42
VRK3-220ENST00000600259 SCN8AQ9UQD0 1980 aa6.15□□□□□ -1.42
VRK3-220ENST00000600259 TCRBV5S1A1TA0A578 114 aa6.15□□□□□ -1.42
VRK3-220ENST00000600259 CFAP69A5D8W1 941 aa6.15□□□□□ -1.42
VRK3-220ENST00000600259 ZSCAN5CA6NGD5 496 aaPredicted RBP6.15□□□□□ -1.42
VRK3-220ENST00000600259 RASA4BC9J798 803 aa6.15□□□□□ -1.42
VRK3-220ENST00000600259 TNFRSF10CO14798 259 aa6.15□□□□□ -1.42
VRK3-220ENST00000600259 RASA4O43374 803 aa6.15□□□□□ -1.42
VRK3-220ENST00000600259 BUB1O43683 1085 aa6.15□□□□□ -1.42
VRK3-220ENST00000600259 NUDT21O43809 227 aaKnown RBP6.15□□□□□ -1.42
VRK3-220ENST00000600259 PIGNO95427 931 aa6.15□□□□□ -1.42
VRK3-220ENST00000600259 LSM8O95777 96 aaKnown RBP6.15□□□□□ -1.42
VRK3-220ENST00000600259 TNFP01375 233 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms