RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 BMPERQ8N8U9 685 aa17.79■□□□□ 0.44
SSBP4-207ENST00000600244 MLKLQ8NB16 471 aa17.79■□□□□ 0.44
SSBP4-207ENST00000600244 DHTKD1Q96HY7 919 aaPredicted RBP17.79■□□□□ 0.44
SSBP4-207ENST00000600244 APOOQ9BUR5 198 aa17.79■□□□□ 0.44
SSBP4-207ENST00000600244 ZDHHC6Q9H6R6 413 aa17.79■□□□□ 0.44
SSBP4-207ENST00000600244 KLQ9UEF7 1012 aa17.79■□□□□ 0.44
SSBP4-207ENST00000600244 TLK1Q9UKI8 766 aa17.79■□□□□ 0.44
SSBP4-207ENST00000600244 ARHGEF17Q96PE2 2063 aaPredicted RBP17.78■□□□□ 0.44
SSBP4-207ENST00000600244 TCP11X1B4DZS4 312 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 PRF1P14222 555 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 HTR1BP28222 390 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 GKP32189 559 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 GPD2P43304 727 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 SERPINH1P50454 418 aaKnown RBP17.78■□□□□ 0.44
SSBP4-207ENST00000600244 DNA2P51530 1060 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 MRPL49Q13405 166 aaKnown RBP17.78■□□□□ 0.44
SSBP4-207ENST00000600244 WSCD2Q2TBF2 565 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 DPCR1Q3MIW9 517 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 CBWD6Q4V339 395 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 CBWD3Q5JTY5 395 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 CBWD5Q5RIA9 395 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 SPECC1LQ69YQ0 1117 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 TMEM270Q6UE05 265 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 TAF8Q7Z7C8 310 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 RTP4Q96DX8 246 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 PDXPQ96GD0 296 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 TEFMQ96QE5 360 aaKnown RBP17.78■□□□□ 0.44
SSBP4-207ENST00000600244 SLC4A5Q9BY07 1137 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 INTS2Q9H0H0 1204 aaKnown RBP17.78■□□□□ 0.44
SSBP4-207ENST00000600244 CYP4F12Q9HCS2 524 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 DDIT4Q9NX09 232 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 HECAQ9UBI9 543 aaPredicted RBP17.78■□□□□ 0.44
SSBP4-207ENST00000600244 PDZD2O15018 2839 aa17.78■□□□□ 0.44
SSBP4-207ENST00000600244 PRRC2CQ9Y520 2896 aaKnown RBP17.77■□□□□ 0.44
SSBP4-207ENST00000600244 B4DGG1 531 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 PAGE1O75459 146 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 CALCAP01258 141 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 ALDH4A1P30038 563 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 CSTF2P33240 577 aaKnown RBP eCLIP17.77■□□□□ 0.44
SSBP4-207ENST00000600244 ACADSBP45954 432 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 COPB1P53618 953 aaKnown RBP17.77■□□□□ 0.44
SSBP4-207ENST00000600244 PMS1P54277 932 aaKnown RBP17.77■□□□□ 0.44
SSBP4-207ENST00000600244 RAB15P59190 212 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 MTA1Q13330 715 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 ADAM9Q13443 819 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 SQSTM1Q13501 440 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 TAF5Q15542 800 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 RETSATQ6NUM9 610 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 IRF2BP1Q8IU81 584 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 ZNF683Q8IZ20 524 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 OR7D4Q8NG98 312 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 OR4D9Q8NGE8 314 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 MED15Q96RN5 788 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 DPEP2Q9H4A9 486 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 THAP9Q9H5L6 903 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 FAM204AQ9H8W3 233 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 ST7Q9NRC1 585 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 CELSR1Q9NYQ6 3014 aa17.77■□□□□ 0.44
SSBP4-207ENST00000600244 PSMA7O14818 248 aa17.76■□□□□ 0.43
SSBP4-207ENST00000600244 STX10O60499 249 aa17.76■□□□□ 0.43
SSBP4-207ENST00000600244 SORBS2O94875 1100 aaKnown RBP17.76■□□□□ 0.43
SSBP4-207ENST00000600244 LETM1O95202 739 aaPredicted RBP17.76■□□□□ 0.43
SSBP4-207ENST00000600244 CD160O95971 181 aa17.76■□□□□ 0.43
SSBP4-207ENST00000600244 THRAP10827 490 aa17.76■□□□□ 0.43
SSBP4-207ENST00000600244 TIMP2P16035 220 aa17.76■□□□□ 0.43
SSBP4-207ENST00000600244 ITIH2P19823 946 aa17.76■□□□□ 0.43
SSBP4-207ENST00000600244 RPL13P26373 211 aaKnown RBP17.76■□□□□ 0.43
SSBP4-207ENST00000600244 CDK17Q00537 523 aa17.76■□□□□ 0.43
SSBP4-207ENST00000600244 STIM1Q13586 685 aa17.76■□□□□ 0.43
SSBP4-207ENST00000600244 LRRC14Q15048 493 aa17.76■□□□□ 0.43
SSBP4-207ENST00000600244 TTI2Q6NXR4 508 aa17.76■□□□□ 0.43
SSBP4-207ENST00000600244 ZC3H18Q86VM9 953 aaKnown RBP17.76■□□□□ 0.43
SSBP4-207ENST00000600244 ATL2Q8NHH9 583 aa17.76■□□□□ 0.43
SSBP4-207ENST00000600244 PRR7Q8TB68 274 aa17.76■□□□□ 0.43
SSBP4-207ENST00000600244 OR1E3Q8WZA6 343 aa17.76■□□□□ 0.43
SSBP4-207ENST00000600244 WDR92Q96MX6 357 aa17.76■□□□□ 0.43
SSBP4-207ENST00000600244 FCF1Q9Y324 198 aaKnown RBP17.76■□□□□ 0.43
SSBP4-207ENST00000600244 TMEM184BQ9Y519 407 aaPredicted RBP17.76■□□□□ 0.43
SSBP4-207ENST00000600244 MRPS18BQ9Y676 258 aaKnown RBP17.76■□□□□ 0.43
SSBP4-207ENST00000600244 ZNF106Q9H2Y7 1883 aaKnown RBP17.75■□□□□ 0.43
SSBP4-207ENST00000600244 CHD5Q8TDI0 1954 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 SYNJ2BP-COX16A0A087WUM0 186 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 DRGXA6NNA5 263 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 RFPL1O75677 317 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 ADCY5O95622 1261 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 FURINP09958 794 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 F8A1P23610 371 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 TBXAS1P24557 533 aaPredicted RBP17.75■□□□□ 0.43
SSBP4-207ENST00000600244 MAZP56270 477 aaKnown RBP17.75■□□□□ 0.43
SSBP4-207ENST00000600244 ARF5P84085 180 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 LRRC63Q05C16 580 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 INPP5AQ14642 412 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 CT47A1Q5JQC4 288 aaPredicted RBP17.75■□□□□ 0.43
SSBP4-207ENST00000600244 ARTNQ5T4W7 220 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 ANKRD40Q6AI12 368 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 TMEM110Q86TL2 294 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 TTC7BQ86TV6 843 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 NRSN1Q8IZ57 195 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 OR6K2Q8NGY2 324 aa17.75■□□□□ 0.43
SSBP4-207ENST00000600244 CCL4L1Q8NHW4 92 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms