RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 SPTBN2O15020 2390 aa28.39■■■□□ 2.14
SSBP4-206ENST00000599699 A6NNZ2 444 aa28.39■■■□□ 2.14
SSBP4-206ENST00000599699 TRAFD1O14545 582 aaPredicted RBP28.39■■■□□ 2.14
SSBP4-206ENST00000599699 FPGTO14772 594 aa28.39■■■□□ 2.14
SSBP4-206ENST00000599699 SOCS5O75159 536 aa28.39■■■□□ 2.14
SSBP4-206ENST00000599699 ARRB1P49407 418 aaPredicted RBP28.39■■■□□ 2.14
SSBP4-206ENST00000599699 TFDP3Q5H9I0 405 aa28.39■■■□□ 2.14
SSBP4-206ENST00000599699 SPATS2Q86XZ4 545 aaKnown RBP28.39■■■□□ 2.14
SSBP4-206ENST00000599699 OR13H1Q8NG92 308 aa28.39■■■□□ 2.14
SSBP4-206ENST00000599699 ASB12Q8WXK4 309 aa28.39■■■□□ 2.14
SSBP4-206ENST00000599699 CAMK1GQ96NX5 476 aa28.39■■■□□ 2.14
SSBP4-206ENST00000599699 LENG8Q96PV6 779 aaPredicted RBP28.39■■■□□ 2.14
SSBP4-206ENST00000599699 PCDHB9Q9Y5E1 797 aa28.39■■■□□ 2.14
SSBP4-206ENST00000599699 PCDHGB2Q9Y5G2 931 aa28.39■■■□□ 2.14
SSBP4-206ENST00000599699 DOCK9Q9BZ29 2069 aa28.39■■■□□ 2.13
SSBP4-206ENST00000599699 A0A1B0GTQ1 180 aa28.38■■■□□ 2.13
SSBP4-206ENST00000599699 MED19A0JLT2 244 aaPredicted RBP28.38■■■□□ 2.13
SSBP4-206ENST00000599699 KCNK1O00180 336 aa28.38■■■□□ 2.13
SSBP4-206ENST00000599699 PPP1R12AO14974 1030 aaPredicted RBP28.38■■■□□ 2.13
SSBP4-206ENST00000599699 CST8O60676 142 aa28.38■■■□□ 2.13
SSBP4-206ENST00000599699 JCHAINP01591 159 aa28.38■■■□□ 2.13
SSBP4-206ENST00000599699 MMP12P39900 470 aa28.38■■■□□ 2.13
SSBP4-206ENST00000599699 PPIDQ08752 370 aaKnown RBP28.38■■■□□ 2.13
SSBP4-206ENST00000599699 Q6ZSR6 202 aa28.38■■■□□ 2.13
SSBP4-206ENST00000599699 OXR1Q8N573 874 aa28.38■■■□□ 2.13
SSBP4-206ENST00000599699 EXD1Q8NHP7 514 aa28.38■■■□□ 2.13
SSBP4-206ENST00000599699 FAM174AQ8TBP5 190 aa28.38■■■□□ 2.13
SSBP4-206ENST00000599699 TRIM10Q9UDY6 481 aa28.38■■■□□ 2.13
SSBP4-206ENST00000599699 AMACRQ9UHK6 382 aa28.38■■■□□ 2.13
SSBP4-206ENST00000599699 A0A1W2PQ67 120 aa28.37■■■□□ 2.13
SSBP4-206ENST00000599699 CPP00450 1065 aa28.37■■■□□ 2.13
SSBP4-206ENST00000599699 LIG3P49916 1009 aa28.37■■■□□ 2.13
SSBP4-206ENST00000599699 FOXK2Q01167 660 aa28.37■■■□□ 2.13
SSBP4-206ENST00000599699 TRAF2Q12933 501 aa28.37■■■□□ 2.13
SSBP4-206ENST00000599699 TAZQ16635 292 aa28.37■■■□□ 2.13
SSBP4-206ENST00000599699 BZW1Q7L1Q6 419 aaKnown RBP28.37■■■□□ 2.13
SSBP4-206ENST00000599699 ABI3BPQ7Z7G0 1075 aa28.37■■■□□ 2.13
SSBP4-206ENST00000599699 ERVMER34-1Q9H9K5 563 aa28.37■■■□□ 2.13
SSBP4-206ENST00000599699 SEPT10Q9P0V9 454 aa28.37■■■□□ 2.13
SSBP4-206ENST00000599699 COQ6Q9Y2Z9 468 aa28.37■■■□□ 2.13
SSBP4-206ENST00000599699 GRID2IPA4D2P6 1211 aa28.36■■■□□ 2.13
SSBP4-206ENST00000599699 POM121BA6NF01 834 aa28.36■■■□□ 2.13
SSBP4-206ENST00000599699 FLRT2O43155 660 aa28.36■■■□□ 2.13
SSBP4-206ENST00000599699 HTRA2O43464 458 aaPredicted RBP28.36■■■□□ 2.13
SSBP4-206ENST00000599699 LZTS3O60299 673 aaPredicted RBP28.36■■■□□ 2.13
SSBP4-206ENST00000599699 HLA-DQB2P05538 268 aa28.36■■■□□ 2.13
SSBP4-206ENST00000599699 C6P13671 934 aa28.36■■■□□ 2.13
SSBP4-206ENST00000599699 CES1P23141 567 aa28.36■■■□□ 2.13
SSBP4-206ENST00000599699 CTNNA1P35221 906 aaKnown RBP28.36■■■□□ 2.13
SSBP4-206ENST00000599699 NR2C2P49116 596 aa28.36■■■□□ 2.13
SSBP4-206ENST00000599699 DSC2Q02487 901 aa28.36■■■□□ 2.13
SSBP4-206ENST00000599699 ARMC12Q5T9G4 340 aa28.36■■■□□ 2.13
SSBP4-206ENST00000599699 KYAT3Q6YP21 454 aaKnown RBP28.36■■■□□ 2.13
SSBP4-206ENST00000599699 DENND6BQ8NEG7 585 aa28.36■■■□□ 2.13
SSBP4-206ENST00000599699 BMFQ96LC9 184 aa28.36■■■□□ 2.13
SSBP4-206ENST00000599699 KLF6Q99612 283 aaPredicted RBP28.36■■■□□ 2.13
SSBP4-206ENST00000599699 SAE1Q9UBE0 346 aaPredicted RBP28.36■■■□□ 2.13
SSBP4-206ENST00000599699 PCDHA3Q9Y5H8 950 aa28.36■■■□□ 2.13
SSBP4-206ENST00000599699 RAI2Q9Y5P3 530 aa28.36■■■□□ 2.13
SSBP4-206ENST00000599699 hCG_1818297A0A087WSY0 165 aa28.35■■■□□ 2.13
SSBP4-206ENST00000599699 A0A0U1RQJ8 604 aa28.35■■■□□ 2.13
SSBP4-206ENST00000599699 A8MX80 341 aa28.35■■■□□ 2.13
SSBP4-206ENST00000599699 YKT6O15498 198 aa28.35■■■□□ 2.13
SSBP4-206ENST00000599699 PCDHGA12O60330 932 aa28.35■■■□□ 2.13
SSBP4-206ENST00000599699 NFKBIAP25963 317 aa28.35■■■□□ 2.13
SSBP4-206ENST00000599699 N4BP2L1Q5TBK1 243 aaPredicted RBP28.35■■■□□ 2.13
SSBP4-206ENST00000599699 B4GALNT4Q76KP1 1039 aa28.35■■■□□ 2.13
SSBP4-206ENST00000599699 CCDC112Q8NEF3 446 aa28.35■■■□□ 2.13
SSBP4-206ENST00000599699 RHBDD1Q8TEB9 315 aa28.35■■■□□ 2.13
SSBP4-206ENST00000599699 OLFM3Q96PB7 478 aa28.35■■■□□ 2.13
SSBP4-206ENST00000599699 HEMGNQ9BXL5 484 aa28.35■■■□□ 2.13
SSBP4-206ENST00000599699 BRD8Q9H0E9 1235 aa28.35■■■□□ 2.13
SSBP4-206ENST00000599699 CCDC66A2RUB6 948 aa28.34■■■□□ 2.13
SSBP4-206ENST00000599699 ITGAVP06756 1048 aa28.34■■■□□ 2.13
SSBP4-206ENST00000599699 ELFN1P0C7U0 828 aa28.34■■■□□ 2.13
SSBP4-206ENST00000599699 TGM2P21980 687 aa28.34■■■□□ 2.13
SSBP4-206ENST00000599699 RABIFP47224 123 aa28.34■■■□□ 2.13
SSBP4-206ENST00000599699 INAVAQ3KP66 663 aa28.34■■■□□ 2.13
SSBP4-206ENST00000599699 DPPA4Q7L190 304 aa28.34■■■□□ 2.13
SSBP4-206ENST00000599699 PEX26Q7Z412 305 aa28.34■■■□□ 2.13
SSBP4-206ENST00000599699 GATAD2AQ86YP4 633 aa28.34■■■□□ 2.13
SSBP4-206ENST00000599699 DCP2Q8IU60 420 aaKnown RBP28.34■■■□□ 2.13
SSBP4-206ENST00000599699 SYCE1Q8N0S2 351 aa28.34■■■□□ 2.13
SSBP4-206ENST00000599699 LRRC57Q8N9N7 239 aa28.34■■■□□ 2.13
SSBP4-206ENST00000599699 P3H4Q92791 437 aa28.34■■■□□ 2.13
SSBP4-206ENST00000599699 CENPTQ96BT3 561 aa28.34■■■□□ 2.13
SSBP4-206ENST00000599699 HAUS1Q96CS2 278 aa28.34■■■□□ 2.13
SSBP4-206ENST00000599699 AMFRQ9UKV5 643 aa28.34■■■□□ 2.13
SSBP4-206ENST00000599699 PHTF1Q9UMS5 762 aa28.34■■■□□ 2.13
SSBP4-206ENST00000599699 TMEM131Q92545 1883 aa28.34■■■□□ 2.13
SSBP4-206ENST00000599699 SPAARA0A1B0GVQ0 90 aa28.33■■■□□ 2.13
SSBP4-206ENST00000599699 PGLSO95336 258 aa28.33■■■□□ 2.13
SSBP4-206ENST00000599699 PECAM1P16284 738 aaPredicted RBP28.33■■■□□ 2.13
SSBP4-206ENST00000599699 CTNNA2P26232 953 aa28.33■■■□□ 2.13
SSBP4-206ENST00000599699 GRK6P43250 576 aa28.33■■■□□ 2.13
SSBP4-206ENST00000599699 RWDD2BP57060 319 aa28.33■■■□□ 2.13
SSBP4-206ENST00000599699 IFI35P80217 286 aaPredicted RBP28.33■■■□□ 2.13
SSBP4-206ENST00000599699 SIM1P81133 766 aaPredicted RBP28.33■■■□□ 2.13
SSBP4-206ENST00000599699 ADCY2Q08462 1091 aa28.33■■■□□ 2.13
SSBP4-206ENST00000599699 ZBTB17Q13105 803 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms