RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 MED19A0JLT2 244 aaPredicted RBP19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 C10orf142B7Z368 130 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 SPINT1O43278 529 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 FOXD2O60548 495 aaPredicted RBP19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 PRKCGP05129 697 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 ITIH2P19823 946 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 TGM1P22735 817 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 NFKBIAP25963 317 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 RBL1P28749 1068 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 CD86P42081 329 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 FAM193AP78312 1265 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 AASDHQ4L235 1098 aaPredicted RBP19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 SEL1L3Q68CR1 1132 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 SLC23A3Q6PIS1 610 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 SLC13A5Q86YT5 568 aaPredicted RBP19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 SERAC1Q96JX3 654 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 TEKT5Q96M29 485 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 VAT1Q99536 393 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 SLC25A51Q9H1U9 297 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 C10orf88Q9H8K7 445 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 EBF2Q9HAK2 575 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 GLOD4Q9HC38 313 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 TM9SF3Q9HD45 589 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 AASDHPPTQ9NRN7 309 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 PHTF1Q9UMS5 762 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 SLC6A14Q9UN76 642 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 DMTF1Q9Y222 760 aa19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.8■□□□□ 0.76
SHKBP1-214ENST00000597396 PCDH15Q96QU1 1955 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 DMXL1Q9Y485 3027 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 TCRBV7S2A1N4TA0A589 114 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 USP27XA6NNY8 438 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 ENC1O14682 589 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 RIOK3O14730 519 aaKnown RBP19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 SLC31A1O15431 190 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 ZNF189O75820 626 aaPredicted RBP19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 STK10O94804 968 aaKnown RBP19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 PGLSO95336 258 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 PRLRP16471 622 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 LMNB2Q03252 620 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 WASHC5Q12768 1159 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 SGCGQ13326 291 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 TEAD4Q15561 434 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 ZNF284Q2VY69 593 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 TMEM259Q4ZIN3 620 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 NAPEPLDQ6IQ20 393 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 PID1Q7Z2X4 250 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 ADAT2Q7Z6V5 191 aaKnown RBP19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 NDUFAF2Q8N183 169 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 C1orf216Q8TAB5 229 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 SLC6A18Q96N87 628 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 ORAI3Q9BRQ5 295 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 WRAP53Q9BUR4 548 aaKnown RBP19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 SLCO1B1Q9Y6L6 691 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 FRYLO94915 3013 aa19.79■□□□□ 0.76
SHKBP1-214ENST00000597396 IGLON5A6NGN9 336 aa19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 KCNN4O15554 427 aa19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 CEP104O60308 925 aa19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 SDHBP21912 280 aa19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 MMP12P39900 470 aa19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 AFF3P51826 1226 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 EPHB1P54762 984 aa19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 RACK1P63244 317 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 IRX4P78413 519 aa19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 SKOR1P84550 965 aa19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 SEMG2Q02383 582 aa19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 TMEM52BQ4KMG9 183 aa19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 ZNF567Q8N184 647 aa19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 IMP4Q96G21 291 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 RBM15Q96T37 977 aaKnown RBP eCLIP19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 MYOCQ99972 504 aa19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 TDRD1Q9BXT4 1180 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 SLC17A9Q9BYT1 436 aa19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 CAPN10Q9HC96 672 aa19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 TRHDEQ9UKU6 1024 aa19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 CHKBQ9Y259 395 aa19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 R3HDM2Q9Y2K5 976 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 DNAH14Q0VDD8 3507 aa19.78■□□□□ 0.76
SHKBP1-214ENST00000597396 KNL1Q8NG31 2342 aa19.77■□□□□ 0.76
SHKBP1-214ENST00000597396 PRAMEF26H0Y7S4 382 aa19.77■□□□□ 0.76
SHKBP1-214ENST00000597396 MMP20O60882 483 aa19.77■□□□□ 0.76
SHKBP1-214ENST00000597396 TM7SF2O76062 418 aa19.77■□□□□ 0.76
SHKBP1-214ENST00000597396 SYPP08247 313 aa19.77■□□□□ 0.76
SHKBP1-214ENST00000597396 MMP2P08253 660 aa19.77■□□□□ 0.76
SHKBP1-214ENST00000597396 CYP2A6P11509 494 aaPredicted RBP19.77■□□□□ 0.76
SHKBP1-214ENST00000597396 NFKB1P19838 968 aa19.77■□□□□ 0.76
SHKBP1-214ENST00000597396 HNRNPA2B1P22626 353 aaKnown RBP19.77■□□□□ 0.76
SHKBP1-214ENST00000597396 AKT2P31751 481 aa19.77■□□□□ 0.76
SHKBP1-214ENST00000597396 CXCR5P32302 372 aa19.77■□□□□ 0.76
SHKBP1-214ENST00000597396 GRIA4P48058 902 aa19.77■□□□□ 0.76
SHKBP1-214ENST00000597396 ARHGAP8P85298 464 aa19.77■□□□□ 0.76
SHKBP1-214ENST00000597396 IHHQ14623 411 aa19.77■□□□□ 0.76
SHKBP1-214ENST00000597396 DPPA4Q7L190 304 aa19.77■□□□□ 0.76
SHKBP1-214ENST00000597396 MAIP1Q8WWC4 291 aa19.77■□□□□ 0.76
SHKBP1-214ENST00000597396 SPOCK2Q92563 424 aa19.77■□□□□ 0.76
SHKBP1-214ENST00000597396 PCDH9Q9HC56 1237 aa19.77■□□□□ 0.76
SHKBP1-214ENST00000597396 CDV3Q9UKY7 258 aaKnown RBP19.77■□□□□ 0.76
SHKBP1-214ENST00000597396 LNP1A1A4G5 178 aa19.76■□□□□ 0.75
SHKBP1-214ENST00000597396 PAK4O96013 591 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms