RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 C1QTNF7Q9BXJ2 289 aa17.51■□□□□ 0.39
RETREG3-210ENST00000590541 ZYG11BQ9C0D3 744 aa17.51■□□□□ 0.39
RETREG3-210ENST00000590541 VPS16Q9H269 839 aa17.51■□□□□ 0.39
RETREG3-210ENST00000590541 RNF215Q9Y6U7 377 aa17.51■□□□□ 0.39
RETREG3-210ENST00000590541 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.5■□□□□ 0.39
RETREG3-210ENST00000590541 POP4O95707 220 aaKnown RBP17.5■□□□□ 0.39
RETREG3-210ENST00000590541 PNMA6AP0CW24 399 aaPredicted RBP17.5■□□□□ 0.39
RETREG3-210ENST00000590541 CD82P27701 267 aa17.5■□□□□ 0.39
RETREG3-210ENST00000590541 IGFBP7Q16270 282 aa17.5■□□□□ 0.39
RETREG3-210ENST00000590541 MYLK3Q32MK0 819 aa17.5■□□□□ 0.39
RETREG3-210ENST00000590541 ENPP7Q6UWV6 458 aa17.5■□□□□ 0.39
RETREG3-210ENST00000590541 SFTPA2Q8IWL1 248 aa17.5■□□□□ 0.39
RETREG3-210ENST00000590541 HAPLN3Q96S86 360 aa17.5■□□□□ 0.39
RETREG3-210ENST00000590541 OSBPL1AQ9BXW6 950 aa17.5■□□□□ 0.39
RETREG3-210ENST00000590541 NDFIP2Q9NV92 336 aa17.5■□□□□ 0.39
RETREG3-210ENST00000590541 FANCLQ9NW38 375 aa17.5■□□□□ 0.39
RETREG3-210ENST00000590541 NBPF19A0A087WUL8 3843 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 LRRC10BA6NIK2 292 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 TMEM110-MUSTN1A8MSY1 372 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 PNLIPP16233 465 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 GLB1P16278 677 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 SRP54P61011 504 aaKnown RBP17.49■□□□□ 0.39
RETREG3-210ENST00000590541 SNRPD1P62314 119 aaKnown RBP17.49■□□□□ 0.39
RETREG3-210ENST00000590541 NFATC4Q14934 902 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 C16orf72Q14CZ0 275 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 WSCD2Q2TBF2 565 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 SLC25A52Q3SY17 297 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 CERCAMQ5T4B2 595 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 ATXN7L2Q5T6C5 722 aaPredicted RBP17.49■□□□□ 0.39
RETREG3-210ENST00000590541 BORAQ6PGQ7 559 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 OGFOD3Q6PK18 319 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 GDPD4Q6W3E5 623 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 ARCQ7LC44 396 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 BNIPLQ7Z465 357 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 SPRED1Q7Z699 444 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 EPS8L1Q8TE68 723 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 JPH3Q8WXH2 748 aaPredicted RBP17.49■□□□□ 0.39
RETREG3-210ENST00000590541 RBM15Q96T37 977 aaKnown RBP eCLIP17.49■□□□□ 0.39
RETREG3-210ENST00000590541 WRAP53Q9BUR4 548 aaKnown RBP17.49■□□□□ 0.39
RETREG3-210ENST00000590541 B3GNT4Q9C0J1 378 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 NAT10Q9H0A0 1025 aaKnown RBP17.49■□□□□ 0.39
RETREG3-210ENST00000590541 GANQ9H2C0 597 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 SEMA6CQ9H3T2 930 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 PPARGC1AQ9UBK2 798 aaKnown RBP17.49■□□□□ 0.39
RETREG3-210ENST00000590541 LIMA1Q9UHB6 759 aaKnown RBP17.49■□□□□ 0.39
RETREG3-210ENST00000590541 MAN2B2Q9Y2E5 1009 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 COQ6Q9Y2Z9 468 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 UNC13CQ8NB66 2214 aa17.49■□□□□ 0.39
RETREG3-210ENST00000590541 ZFC3H1O60293 1989 aaKnown RBP17.49■□□□□ 0.39
RETREG3-210ENST00000590541 TIMP2P16035 220 aa17.48■□□□□ 0.39
RETREG3-210ENST00000590541 ARSDP51689 593 aa17.48■□□□□ 0.39
RETREG3-210ENST00000590541 POLE2P56282 527 aa17.48■□□□□ 0.39
RETREG3-210ENST00000590541 KCNAB2Q13303 367 aa17.48■□□□□ 0.39
RETREG3-210ENST00000590541 LRRC14Q15048 493 aa17.48■□□□□ 0.39
RETREG3-210ENST00000590541 POLD3Q15054 466 aaPredicted RBP17.48■□□□□ 0.39
RETREG3-210ENST00000590541 TRNP1Q6NT89 227 aa17.48■□□□□ 0.39
RETREG3-210ENST00000590541 LEKR1Q6ZMV7 388 aa17.48■□□□□ 0.39
RETREG3-210ENST00000590541 NOP9Q86U38 636 aaKnown RBP17.48■□□□□ 0.39
RETREG3-210ENST00000590541 APOOQ9BUR5 198 aa17.48■□□□□ 0.39
RETREG3-210ENST00000590541 KLQ9UEF7 1012 aa17.48■□□□□ 0.39
RETREG3-210ENST00000590541 OR1A2Q9Y585 309 aa17.48■□□□□ 0.39
RETREG3-210ENST00000590541 TEX15Q9BXT5 2789 aa17.48■□□□□ 0.39
RETREG3-210ENST00000590541 CHD5Q8TDI0 1954 aa17.48■□□□□ 0.39
RETREG3-210ENST00000590541 CCL4P13236 92 aa17.47■□□□□ 0.39
RETREG3-210ENST00000590541 CDK11BP21127 795 aaKnown RBP17.47■□□□□ 0.39
RETREG3-210ENST00000590541 HTR1BP28222 390 aa17.47■□□□□ 0.39
RETREG3-210ENST00000590541 SOX5P35711 763 aa17.47■□□□□ 0.39
RETREG3-210ENST00000590541 FLT3P36888 993 aa17.47■□□□□ 0.39
RETREG3-210ENST00000590541 CASRP41180 1078 aa17.47■□□□□ 0.39
RETREG3-210ENST00000590541 COPB1P53618 953 aaKnown RBP17.47■□□□□ 0.39
RETREG3-210ENST00000590541 POLR2FP61218 127 aaKnown RBP17.47■□□□□ 0.39
RETREG3-210ENST00000590541 INPP5AQ14642 412 aa17.47■□□□□ 0.39
RETREG3-210ENST00000590541 TMEM52BQ4KMG9 183 aa17.47■□□□□ 0.39
RETREG3-210ENST00000590541 PHF19Q5T6S3 580 aa17.47■□□□□ 0.39
RETREG3-210ENST00000590541 FAM102AQ5T9C2 384 aaPredicted RBP17.47■□□□□ 0.39
RETREG3-210ENST00000590541 TRIM72Q6ZMU5 477 aa17.47■□□□□ 0.39
RETREG3-210ENST00000590541 FAM131BQ86XD5 332 aa17.47■□□□□ 0.39
RETREG3-210ENST00000590541 XYLT1Q86Y38 959 aa17.47■□□□□ 0.39
RETREG3-210ENST00000590541 NKD1Q969G9 470 aa17.47■□□□□ 0.39
RETREG3-210ENST00000590541 PDXPQ96GD0 296 aa17.47■□□□□ 0.39
RETREG3-210ENST00000590541 PSMG3-AS1Q96PY0 264 aa17.47■□□□□ 0.39
RETREG3-210ENST00000590541 FAM207AQ9NSI2 230 aaPredicted RBP17.47■□□□□ 0.39
RETREG3-210ENST00000590541 LRIT1Q9P2V4 623 aa17.47■□□□□ 0.39
RETREG3-210ENST00000590541 TUBD1Q9UJT1 453 aa17.47■□□□□ 0.39
RETREG3-210ENST00000590541 SIK3Q9Y2K2 1263 aa17.47■□□□□ 0.39
RETREG3-210ENST00000590541 LRRK1Q38SD2 2015 aa17.47■□□□□ 0.39
RETREG3-210ENST00000590541 SDK2Q58EX2 2172 aa17.46■□□□□ 0.39
RETREG3-210ENST00000590541 LRRK2Q5S007 2527 aa17.46■□□□□ 0.39
RETREG3-210ENST00000590541 LGALS16A8MUM7 142 aa17.46■□□□□ 0.39
RETREG3-210ENST00000590541 STMND1H3BQB6 276 aa17.46■□□□□ 0.39
RETREG3-210ENST00000590541 TNFP01375 233 aa17.46■□□□□ 0.39
RETREG3-210ENST00000590541 ETFBP38117 255 aa17.46■□□□□ 0.39
RETREG3-210ENST00000590541 STAT1P42224 750 aa17.46■□□□□ 0.39
RETREG3-210ENST00000590541 JAM2P57087 298 aa17.46■□□□□ 0.39
RETREG3-210ENST00000590541 GEMIN4P57678 1058 aaKnown RBP17.46■□□□□ 0.39
RETREG3-210ENST00000590541 NOMO3P69849 1222 aa17.46■□□□□ 0.39
RETREG3-210ENST00000590541 B4GALNT1Q00973 533 aa17.46■□□□□ 0.39
RETREG3-210ENST00000590541 CDR2Q01850 454 aa17.46■□□□□ 0.39
RETREG3-210ENST00000590541 HLTFQ14527 1009 aaKnown RBP eCLIP17.46■□□□□ 0.39
RETREG3-210ENST00000590541 TMEM164Q5U3C3 297 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms