RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 SGK2Q9HBY8 427 aa12.25□□□□□ -0.45
DNMT1-218ENST00000589294 TPX2Q9ULW0 747 aaKnown RBP12.25□□□□□ -0.45
DNMT1-218ENST00000589294 UTP11Q9Y3A2 253 aaKnown RBP12.25□□□□□ -0.45
DNMT1-218ENST00000589294 A0A1W2PP55 124 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 UPK3BL1B0FP48 263 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 UPK3BL2E5RIL1 263 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 F5H423 210 aaPredicted RBP12.24□□□□□ -0.45
DNMT1-218ENST00000589294 SMAPO00193 183 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 DLL1O00548 723 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 RIOK3O14730 519 aaKnown RBP12.24□□□□□ -0.45
DNMT1-218ENST00000589294 GALR2O43603 387 aaPredicted RBP12.24□□□□□ -0.45
DNMT1-218ENST00000589294 TSPAN6O43657 245 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 CPP00450 1065 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 AGTP01019 485 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 FGF1P05230 155 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 APRTP07741 180 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 ITIH2P19823 946 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 PXNP49023 591 aaPredicted RBP12.24□□□□□ -0.45
DNMT1-218ENST00000589294 VPS41P49754 854 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 METAP1P53582 386 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 BASP1P80723 227 aaKnown RBP12.24□□□□□ -0.45
DNMT1-218ENST00000589294 ELP6Q0PNE2 266 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 SLC1A5Q15758 541 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 QPCTQ16769 361 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 MAP7D1Q3KQU3 841 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 POM121L1PQ3SYA9 428 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 SIRPB2Q5JXA9 342 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 PIP5KL1Q5T9C9 394 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 FAXCQ5TGI0 409 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 C8orf74Q6P047 294 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 ERAP2Q6P179 960 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 KDELC2Q7Z4H8 507 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 LONP2Q86WA8 852 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 ZSWIM9Q86XI8 627 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 PPIL6Q8IXY8 311 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 TAB3Q8N5C8 712 aaPredicted RBP12.24□□□□□ -0.45
DNMT1-218ENST00000589294 NOA1Q8NC60 698 aaKnown RBP12.24□□□□□ -0.45
DNMT1-218ENST00000589294 BBOF1Q8ND07 529 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 RMDN1Q96DB5 314 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 MCCC1Q96RQ3 725 aaPredicted RBP12.24□□□□□ -0.45
DNMT1-218ENST00000589294 LYSMD1Q96S90 227 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 PRRX2Q99811 253 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 TBL1YQ9BQ87 522 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 LRFN3Q9BTN0 628 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 LRRC1Q9BTT6 524 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 BTBD1Q9H0C5 482 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 MAGEE1Q9HCI5 957 aa12.24□□□□□ -0.45
DNMT1-218ENST00000589294 A0A0J9YYE9 177 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 LRRC72A6NJI9 287 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 EFCAB8A8MWE9 144 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 DNALI1O14645 258 aaPredicted RBP12.23□□□□□ -0.45
DNMT1-218ENST00000589294 AREL1O15033 823 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 PLRG1O43660 514 aaKnown RBP12.23□□□□□ -0.45
DNMT1-218ENST00000589294 TRBC1P01850 177 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 ATXN1LP0C7T5 689 aaKnown RBP12.23□□□□□ -0.45
DNMT1-218ENST00000589294 CD6P30203 668 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 CNR2P34972 360 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 KCNJ11Q14654 390 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 ANGPT1Q15389 498 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 TMEM52BQ4KMG9 183 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 AGBL4Q5VU57 503 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 DUPD1Q68J44 220 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 DENND5AQ6IQ26 1287 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 TSSK4Q6SA08 328 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 SLC36A4Q6YBV0 504 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 USP45Q70EL2 814 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 C11orf74Q86VG3 221 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 HOOK3Q86VS8 718 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 CACUL1Q86Y37 369 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 RAVER1Q8IY67 606 aaKnown RBP12.23□□□□□ -0.45
DNMT1-218ENST00000589294 NAT8LQ8N9F0 302 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 MCUQ8NE86 351 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 LPCAT1Q8NF37 534 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 OR14C36Q8NHC7 312 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 CPT1BQ92523 772 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 SNF8Q96H20 258 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 FICDQ9BVA6 458 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 FRMD8Q9BZ67 464 aaPredicted RBP12.23□□□□□ -0.45
DNMT1-218ENST00000589294 TPSD1Q9BZJ3 242 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 PCED1AQ9H1Q7 454 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 TRABDQ9H4I3 376 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 PREBQ9HCU5 417 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 PCDH12Q9NPG4 1184 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 ZSCAN32Q9NX65 697 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 WSB2Q9NYS7 404 aaPredicted RBP12.23□□□□□ -0.45
DNMT1-218ENST00000589294 HACD3Q9P035 362 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 WHRNQ9P202 907 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 SERGEFQ9UGK8 458 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 FADS3Q9Y5Q0 445 aa12.23□□□□□ -0.45
DNMT1-218ENST00000589294 IGHV1OR15-9A0A0B4J2B8 117 aa12.22□□□□□ -0.45
DNMT1-218ENST00000589294 H0Y858 1186 aa12.22□□□□□ -0.45
DNMT1-218ENST00000589294 PLK4O00444 970 aa12.22□□□□□ -0.45
DNMT1-218ENST00000589294 NEMP1O14524 444 aa12.22□□□□□ -0.45
DNMT1-218ENST00000589294 SLU7O95391 586 aaKnown RBP12.22□□□□□ -0.45
DNMT1-218ENST00000589294 SP9P0CG40 484 aa12.22□□□□□ -0.45
DNMT1-218ENST00000589294 CYP2A6P11509 494 aaPredicted RBP12.22□□□□□ -0.45
DNMT1-218ENST00000589294 MLNP12872 115 aa12.22□□□□□ -0.45
DNMT1-218ENST00000589294 HNF1BP35680 557 aa12.22□□□□□ -0.45
DNMT1-218ENST00000589294 NPY2RP49146 381 aa12.22□□□□□ -0.45
DNMT1-218ENST00000589294 FNTBP49356 437 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms