RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 FAM102AQ5T9C2 384 aaPredicted RBP21.96■■□□□ 1.11
CAPNS1-205ENST00000588780 SPECC1LQ69YQ0 1117 aa21.96■■□□□ 1.11
CAPNS1-205ENST00000588780 OGFOD3Q6PK18 319 aa21.96■■□□□ 1.11
CAPNS1-205ENST00000588780 FAM131BQ86XD5 332 aa21.96■■□□□ 1.11
CAPNS1-205ENST00000588780 ZDHHC17Q8IUH5 632 aa21.96■■□□□ 1.11
CAPNS1-205ENST00000588780 PGAP3Q96FM1 320 aaPredicted RBP21.96■■□□□ 1.11
CAPNS1-205ENST00000588780 CRACR2AQ9BSW2 395 aa21.96■■□□□ 1.11
CAPNS1-205ENST00000588780 SCAND2PQ9GZW5 306 aaPredicted RBP21.96■■□□□ 1.11
CAPNS1-205ENST00000588780 ZMYND15Q9H091 742 aa21.96■■□□□ 1.11
CAPNS1-205ENST00000588780 PLCB1Q9NQ66 1216 aa21.96■■□□□ 1.11
CAPNS1-205ENST00000588780 ZNF212Q9UDV6 495 aa21.96■■□□□ 1.11
CAPNS1-205ENST00000588780 ENO4A6NNW6 628 aa21.95■■□□□ 1.1
CAPNS1-205ENST00000588780 BECN2A8MW95 431 aa21.95■■□□□ 1.1
CAPNS1-205ENST00000588780 CACNB4O00305 520 aaPredicted RBP21.95■■□□□ 1.1
CAPNS1-205ENST00000588780 HGSO14964 777 aaPredicted RBP21.95■■□□□ 1.1
CAPNS1-205ENST00000588780 BUB1O43683 1085 aa21.95■■□□□ 1.1
CAPNS1-205ENST00000588780 IGSF6O95976 241 aa21.95■■□□□ 1.1
CAPNS1-205ENST00000588780 PPM1FP49593 454 aaPredicted RBP21.95■■□□□ 1.1
CAPNS1-205ENST00000588780 HLTFQ14527 1009 aaKnown RBP eCLIP21.95■■□□□ 1.1
CAPNS1-205ENST00000588780 KIAA1524Q8TCG1 905 aa21.95■■□□□ 1.1
CAPNS1-205ENST00000588780 ART4Q93070 314 aa21.95■■□□□ 1.1
CAPNS1-205ENST00000588780 PMEPA1Q969W9 287 aa21.95■■□□□ 1.1
CAPNS1-205ENST00000588780 FAM81BQ96LP2 452 aa21.95■■□□□ 1.1
CAPNS1-205ENST00000588780 CCDC74BQ96LY2 380 aa21.95■■□□□ 1.1
CAPNS1-205ENST00000588780 CDH19Q9H159 772 aa21.95■■□□□ 1.1
CAPNS1-205ENST00000588780 SUDS3Q9H7L9 328 aaPredicted RBP21.95■■□□□ 1.1
CAPNS1-205ENST00000588780 TMEM51Q9NW97 253 aa21.95■■□□□ 1.1
CAPNS1-205ENST00000588780 DGKBQ9Y6T7 804 aa21.95■■□□□ 1.1
CAPNS1-205ENST00000588780 NKX2-8O15522 239 aa21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 FGF3P11487 239 aaPredicted RBP21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 RHOAP61586 193 aa21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 B4GALNT1Q00973 533 aa21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 TMEM52BQ4KMG9 183 aa21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 CFAP58Q5T655 872 aa21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 KCTD16Q68DU8 428 aa21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 CREBRFQ8IUR6 639 aa21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 TRIM59Q8IWR1 403 aa21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 NRSN1Q8IZ57 195 aa21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 NETO2Q8NC67 525 aa21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 OR56A4Q8NGH8 313 aa21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 OR1E3Q8WZA6 343 aa21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 SNX21Q969T3 373 aa21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 KIAA1143Q96AT1 154 aaPredicted RBP21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 HMCESQ96FZ2 354 aa21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 NUDT22Q9BRQ3 303 aa21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 TMEM168Q9H0V1 697 aa21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 GPN2Q9H9Y4 310 aaPredicted RBP21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 MRPL40Q9NQ50 206 aaKnown RBP21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 SLC39A1Q9NY26 324 aa21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 PPARGC1AQ9UBK2 798 aaKnown RBP21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 B3GALT1Q9Y5Z6 326 aa21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 DOCK4Q8N1I0 1966 aa21.94■■□□□ 1.1
CAPNS1-205ENST00000588780 CAPN5O15484 640 aaPredicted RBP21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 MTSS1O43312 755 aa21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 B4GAT1O43505 415 aa21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 RAD1O60671 282 aa21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 UTP20O75691 2785 aaKnown RBP21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 TMCC1O94876 653 aa21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 GNA14O95837 355 aa21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 CSTF2P33240 577 aaKnown RBP eCLIP21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 MAZP56270 477 aaKnown RBP21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 MTM1Q13496 603 aa21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 SEPT6Q14141 434 aa21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 LRRK1Q38SD2 2015 aa21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 LACTB2Q53H82 288 aaPredicted RBP21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 ERAP2Q6P179 960 aa21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 FAM129CQ86XR2 697 aa21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 NELFBQ8WX92 580 aa21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 NT5C3BQ969T7 300 aa21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 ABHD17AQ96GS6 310 aa21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 TTYH3Q9C0H2 523 aa21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 CYP4F12Q9HCS2 524 aa21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 NDFIP2Q9NV92 336 aa21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 DKK3Q9UBP4 350 aa21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 PLEKHB1Q9UF11 243 aaPredicted RBP21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 HOOK1Q9UJC3 728 aaKnown RBP21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 ICE1Q9Y2F5 2266 aa21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 RELNP78509 3460 aa21.93■■□□□ 1.1
CAPNS1-205ENST00000588780 IGHV5-10-1A0A0J9YXX1 117 aa21.92■■□□□ 1.1
CAPNS1-205ENST00000588780 CXorf51AA0A1B0GTR3 108 aa21.92■■□□□ 1.1
CAPNS1-205ENST00000588780 BICDL2A1A5D9 508 aa21.92■■□□□ 1.1
CAPNS1-205ENST00000588780 GOLGA8SH3BPF8 625 aa21.92■■□□□ 1.1
CAPNS1-205ENST00000588780 RAMP2O60895 175 aa21.92■■□□□ 1.1
CAPNS1-205ENST00000588780 AGFG2O95081 481 aa21.92■■□□□ 1.1
CAPNS1-205ENST00000588780 KELP23276 732 aa21.92■■□□□ 1.1
CAPNS1-205ENST00000588780 MAPKAPK2P49137 400 aa21.92■■□□□ 1.1
CAPNS1-205ENST00000588780 LIG3P49916 1009 aa21.92■■□□□ 1.1
CAPNS1-205ENST00000588780 DEFB109BQ30KR1 87 aa21.92■■□□□ 1.1
CAPNS1-205ENST00000588780 PAF1Q8N7H5 531 aa21.92■■□□□ 1.1
CAPNS1-205ENST00000588780 AGBL5Q8NDL9 886 aa21.92■■□□□ 1.1
CAPNS1-205ENST00000588780 MAGEH1Q9H213 219 aa21.92■■□□□ 1.1
CAPNS1-205ENST00000588780 GDPD2Q9HCC8 539 aa21.92■■□□□ 1.1
CAPNS1-205ENST00000588780 FGF22Q9HCT0 170 aa21.92■■□□□ 1.1
CAPNS1-205ENST00000588780 CTNND2Q9UQB3 1225 aa21.92■■□□□ 1.1
CAPNS1-205ENST00000588780 PCDHGA3Q9Y5H0 932 aa21.92■■□□□ 1.1
CAPNS1-205ENST00000588780 TMEM202A6NGA9 273 aa21.91■■□□□ 1.1
CAPNS1-205ENST00000588780 PRR19A6NJB7 356 aa21.91■■□□□ 1.1
CAPNS1-205ENST00000588780 CD44P16070 742 aaKnown RBP21.91■■□□□ 1.1
CAPNS1-205ENST00000588780 PPP1R2P41236 205 aa21.91■■□□□ 1.1
CAPNS1-205ENST00000588780 SUOXP51687 545 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms