RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 PARP15Q460N3 678 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 CT47A1Q5JQC4 288 aaPredicted RBP14.18□□□□□ -0.14
DNMT1-213ENST00000587604 EFHC2Q5JST6 749 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 WDR59Q6PJI9 974 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 RD3Q7Z3Z2 195 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 DNAAF5Q86Y56 855 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 UMODL1-AS1Q8N2C9 162 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 PYROXD2Q8N2H3 581 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 ATL2Q8NHH9 583 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 HMCESQ96FZ2 354 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 ZNF641Q96N77 438 aaPredicted RBP14.18□□□□□ -0.14
DNMT1-213ENST00000587604 TMEM74Q96NL1 305 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 NCAPGQ9BPX3 1015 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 SELENOOQ9BVL4 669 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 CLSTN2Q9H4D0 955 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 SUV39H2Q9H5I1 410 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 EPB41L5Q9HCM4 733 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 PCDH12Q9NPG4 1184 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 ADAM22Q9P0K1 906 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 ACSL6Q9UKU0 697 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 COQ6Q9Y2Z9 468 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 DAAM1Q9Y4D1 1078 aa14.18□□□□□ -0.14
DNMT1-213ENST00000587604 A0A1W2PQM1 296 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 TSPAN11A1L157 253 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 SIGLEC16A6NMB1 481 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 D6RAR5 112 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 PIGNO95427 931 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 TNFP01375 233 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 RPLP0P05388 317 aaKnown RBP14.17□□□□□ -0.14
DNMT1-213ENST00000587604 CCKBRP32239 447 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 UGT1A5P35504 534 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 NSFP46459 744 aaKnown RBP14.17□□□□□ -0.14
DNMT1-213ENST00000587604 JAM2P57087 298 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 POLR2FP61218 127 aaKnown RBP14.17□□□□□ -0.14
DNMT1-213ENST00000587604 ERAP2Q6P179 960 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 BRAT1Q6PJG6 821 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 PHF13Q86YI8 300 aaPredicted RBP14.17□□□□□ -0.14
DNMT1-213ENST00000587604 GPR156Q8NFN8 814 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 EXOC2Q96KP1 924 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 WDR92Q96MX6 357 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 RBM15Q96T37 977 aaKnown RBP eCLIP14.17□□□□□ -0.145e-8■■■■■ 49.6
DNMT1-213ENST00000587604 PCDHB18PQ96TA0 734 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 FOXP3Q9BZS1 431 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 LRRN3Q9H3W5 708 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 CATSPERBQ9H7T0 1116 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 TAB2Q9NYJ8 693 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 LHX3Q9UBR4 397 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 UBA2Q9UBT2 640 aaPredicted RBP14.17□□□□□ -0.14
DNMT1-213ENST00000587604 KLQ9UEF7 1012 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 OR1A2Q9Y585 309 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 DGKBQ9Y6T7 804 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 ANKRD36A6QL64 1941 aa14.17□□□□□ -0.14
DNMT1-213ENST00000587604 BOD1L1Q8NFC6 3051 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 HECTD1Q9ULT8 2610 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 CFAP69A5D8W1 941 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 NVLO15381 856 aaKnown RBP14.16□□□□□ -0.14
DNMT1-213ENST00000587604 CREB3O43889 395 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 NOBOXO60393 691 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 CALB1P05937 261 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 STAT1P42224 750 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 KLK7P49862 253 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 LIG3P49916 1009 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 ZNF143P52747 638 aaPredicted RBP14.16□□□□□ -0.14
DNMT1-213ENST00000587604 AIF1P55008 147 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 KCNC4Q03721 635 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 MTM1Q13496 603 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 TCEA2Q15560 299 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 SCYL2Q6P3W7 929 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 OGFOD3Q6PK18 319 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 XKR5Q6UX68 686 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 JAMLQ86YT9 394 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 C3orf20Q8ND61 904 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 VPS16Q9H269 839 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 CLMPQ9H6B4 373 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 NLRC4Q9NPP4 1024 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 FAM207AQ9NSI2 230 aaPredicted RBP14.16□□□□□ -0.14
DNMT1-213ENST00000587604 DONSONQ9NYP3 566 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 APPL1Q9UKG1 709 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 FZD10Q9ULW2 581 aa14.16□□□□□ -0.14
DNMT1-213ENST00000587604 FGF10O15520 208 aaPredicted RBP14.15□□□□□ -0.14
DNMT1-213ENST00000587604 CCP110O43303 1012 aa14.15□□□□□ -0.14
DNMT1-213ENST00000587604 SLC28A2O43868 658 aa14.15□□□□□ -0.14
DNMT1-213ENST00000587604 BUB1BO60566 1050 aaPredicted RBP14.15□□□□□ -0.14
DNMT1-213ENST00000587604 HGFP14210 728 aa14.15□□□□□ -0.14
DNMT1-213ENST00000587604 PNLIPP16233 465 aa14.15□□□□□ -0.14
DNMT1-213ENST00000587604 GLB1P16278 677 aa14.15□□□□□ -0.14
DNMT1-213ENST00000587604 MMP12P39900 470 aa14.15□□□□□ -0.14
DNMT1-213ENST00000587604 ZFP36L1Q07352 338 aaKnown RBP14.15□□□□□ -0.14
DNMT1-213ENST00000587604 CLEC16AQ2KHT3 1053 aa14.15□□□□□ -0.14
DNMT1-213ENST00000587604 CFAP58Q5T655 872 aa14.15□□□□□ -0.14
DNMT1-213ENST00000587604 NYAP1Q6ZVC0 841 aa14.15□□□□□ -0.14
DNMT1-213ENST00000587604 USP53Q70EK8 1073 aa14.15□□□□□ -0.14
DNMT1-213ENST00000587604 CAMK1DQ8IU85 385 aa14.15□□□□□ -0.14
DNMT1-213ENST00000587604 CCNJLQ8IV13 435 aa14.15□□□□□ -0.14
DNMT1-213ENST00000587604 TMEM159Q96B96 161 aa14.15□□□□□ -0.14
DNMT1-213ENST00000587604 TUBGCP5Q96RT8 1024 aa14.15□□□□□ -0.14
DNMT1-213ENST00000587604 LRRC19Q9H756 370 aa14.15□□□□□ -0.14
DNMT1-213ENST00000587604 PDFQ9HBH1 243 aa14.15□□□□□ -0.14
DNMT1-213ENST00000587604 WDR70Q9NW82 654 aa14.15□□□□□ -0.14
DNMT1-213ENST00000587604 PISDQ9UG56 409 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms