RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 WSCD2Q2TBF2 565 aa15.14■□□□□ 0.01
VAPA-209ENST00000585042 TAF1BQ53T94 588 aaPredicted RBP15.14■□□□□ 0.01
VAPA-209ENST00000585042 PPP1R15BQ5SWA1 713 aa15.14■□□□□ 0.01
VAPA-209ENST00000585042 DNAJC24Q6P3W2 148 aa15.14■□□□□ 0.01
VAPA-209ENST00000585042 GKN2Q86XP6 184 aa15.14■□□□□ 0.01
VAPA-209ENST00000585042 ERGIC2Q96RQ1 377 aa15.14■□□□□ 0.01
VAPA-209ENST00000585042 AGPAT1Q99943 283 aa15.14■□□□□ 0.01
VAPA-209ENST00000585042 CCDC3Q9BQI4 270 aa15.14■□□□□ 0.01
VAPA-209ENST00000585042 WRAP53Q9BUR4 548 aaKnown RBP15.14■□□□□ 0.01
VAPA-209ENST00000585042 APOOQ9BUR5 198 aa15.14■□□□□ 0.01
VAPA-209ENST00000585042 LRRC19Q9H756 370 aa15.14■□□□□ 0.01
VAPA-209ENST00000585042 UBA2Q9UBT2 640 aaPredicted RBP15.14■□□□□ 0.01
VAPA-209ENST00000585042 CFAP46Q8IYW2 2715 aa15.13■□□□□ 0.01
VAPA-209ENST00000585042 LGALS16A8MUM7 142 aa15.13■□□□□ 0.01
VAPA-209ENST00000585042 K7ENP7 123 aa15.13■□□□□ 0.01
VAPA-209ENST00000585042 PRAMEF11O60813 436 aa15.13■□□□□ 0.01
VAPA-209ENST00000585042 ITGA2BP08514 1039 aa15.13■□□□□ 0.01
VAPA-209ENST00000585042 HOXC4P09017 264 aaPredicted RBP15.13■□□□□ 0.01
VAPA-209ENST00000585042 ITIH2P19823 946 aa15.13■□□□□ 0.01
VAPA-209ENST00000585042 POLR2LP62875 67 aaKnown RBP15.13■□□□□ 0.01
VAPA-209ENST00000585042 NSUN2Q08J23 767 aaKnown RBP eCLIP15.13■□□□□ 0.01
VAPA-209ENST00000585042 MTM1Q13496 603 aa15.13■□□□□ 0.01
VAPA-209ENST00000585042 INPP5AQ14642 412 aa15.13■□□□□ 0.01
VAPA-209ENST00000585042 NFATC4Q14934 902 aa15.13■□□□□ 0.01
VAPA-209ENST00000585042 LRRC73Q5JTD7 316 aa15.13■□□□□ 0.01
VAPA-209ENST00000585042 ARHGAP40Q5TG30 622 aa15.13■□□□□ 0.01
VAPA-209ENST00000585042 ACAD10Q6JQN1 1059 aa15.13■□□□□ 0.01
VAPA-209ENST00000585042 DCUN1D2Q6PH85 259 aa15.13■□□□□ 0.01
VAPA-209ENST00000585042 INO80CQ6PI98 192 aaPredicted RBP15.13■□□□□ 0.01
VAPA-209ENST00000585042 RBM43Q6ZSC3 357 aaKnown RBP15.13■□□□□ 0.01
VAPA-209ENST00000585042 MCOLN2Q8IZK6 566 aa15.13■□□□□ 0.01
VAPA-209ENST00000585042 PCMTD1Q96MG8 357 aaPredicted RBP15.13■□□□□ 0.01
VAPA-209ENST00000585042 MCEEQ96PE7 176 aa15.13■□□□□ 0.01
VAPA-209ENST00000585042 PDFQ9HBH1 243 aa15.13■□□□□ 0.01
VAPA-209ENST00000585042 CPNE5Q9HCH3 593 aa15.13■□□□□ 0.01
VAPA-209ENST00000585042 PCDH12Q9NPG4 1184 aa15.13■□□□□ 0.01
VAPA-209ENST00000585042 DGKBQ9Y6T7 804 aa15.13■□□□□ 0.01
VAPA-209ENST00000585042 ATMQ13315 3056 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 ARHGAP42A6NI28 874 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 INSIG1O15503 277 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 TNFP01375 233 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 C6P13671 934 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 PNLIPP16233 465 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 FERP16591 822 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 PTMSP20962 102 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 LIG3P49916 1009 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 ZNF135P52742 658 aaPredicted RBP15.12■□□□□ 0.01
VAPA-209ENST00000585042 TPI1P60174 286 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 SRP54P61011 504 aaKnown RBP15.12■□□□□ 0.01
VAPA-209ENST00000585042 RPL7AP62424 266 aaKnown RBP15.12■□□□□ 0.01
VAPA-209ENST00000585042 UBXN1Q04323 297 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 RFTN1Q14699 578 aaPredicted RBP15.12■□□□□ 0.01
VAPA-209ENST00000585042 ALG11Q2TAA5 492 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 CFAP58Q5T655 872 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 OGFOD3Q6PK18 319 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 ENPP7Q6UWV6 458 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 HID1Q8IV36 788 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 TSACCQ96A04 125 aaPredicted RBP15.12■□□□□ 0.01
VAPA-209ENST00000585042 WDR92Q96MX6 357 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 RBM15Q96T37 977 aaKnown RBP eCLIP15.12■□□□□ 0.011e-8■□□□□ 9.3
VAPA-209ENST00000585042 STRADBQ9C0K7 418 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 ATP13A3Q9H7F0 1226 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 SEPT11Q9NVA2 429 aaKnown RBP15.12■□□□□ 0.01
VAPA-209ENST00000585042 GULP1Q9UBP9 304 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 MYO6Q9UM54 1294 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 GPR34Q9UPC5 381 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 ATP8A1Q9Y2Q0 1164 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 PCDHGA7Q9Y5G6 932 aa15.12■□□□□ 0.01
VAPA-209ENST00000585042 TNFRSF10CO14798 259 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 BUB1BO60566 1050 aaPredicted RBP15.11■□□□□ 0.01
VAPA-209ENST00000585042 TNFSF15O95150 251 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 PIGNO95427 931 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 PLA2G2AP14555 144 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 KELP23276 732 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 SERPINA4P29622 427 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 MMP12P39900 470 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 HCAR3P49019 387 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 MYL5Q02045 173 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 ERMARDQ5T6L9 678 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 SASS6Q6UVJ0 657 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 XKR5Q6UX68 686 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 SRLQ86TD4 932 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 PSTKQ8IV42 348 aaKnown RBP15.11■□□□□ 0.01
VAPA-209ENST00000585042 GPR156Q8NFN8 814 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 TTC9Q92623 222 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 TMEM159Q96B96 161 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 ECHDC3Q96DC8 303 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 TMEM74Q96NL1 305 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 GFM1Q96RP9 751 aaKnown RBP15.11■□□□□ 0.01
VAPA-209ENST00000585042 PARVAQ9NVD7 372 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 ANO10Q9NW15 660 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 KCTD5Q9NXV2 234 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 KLQ9UEF7 1012 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 APPL1Q9UKG1 709 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 ACSL6Q9UKU0 697 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 COQ6Q9Y2Z9 468 aa15.11■□□□□ 0.01
VAPA-209ENST00000585042 J3KR12 359 aa15.1■□□□□ 0.01
VAPA-209ENST00000585042 PLD2O14939 933 aa15.1■□□□□ 0.01
VAPA-209ENST00000585042 PALMO75781 387 aa15.1■□□□□ 0.01
VAPA-209ENST00000585042 GLB1P16278 677 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms