RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 J3KR12 359 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 LEFTY2O00292 366 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 AVILO75366 819 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 PRKCHP24723 683 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 ATP5DP30049 168 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 PLK1P53350 603 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 SKOR1P84550 965 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 SLC10A7Q0GE19 358 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 NR1H3Q13133 447 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 SLC12A1Q13621 1099 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 PON2Q15165 354 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 INO80DQ53TQ3 878 aaPredicted RBP12.08□□□□□ -0.48
GGA3-217ENST00000583667 GPR158Q5T848 1215 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 FYB2Q5VWT5 728 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 RANBP10Q6VN20 620 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 ARFGAP2Q8N6H7 521 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 ZNF557Q8N988 423 aaPredicted RBP12.08□□□□□ -0.48
GGA3-217ENST00000583667 TTC17Q96AE7 1141 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 OTUB2Q96DC9 234 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 ALG14Q96F25 216 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 OXNAD1Q96HP4 312 aaPredicted RBP12.08□□□□□ -0.48
GGA3-217ENST00000583667 ZNF419Q96HQ0 510 aaPredicted RBP12.08□□□□□ -0.48
GGA3-217ENST00000583667 PSKH2Q96QS6 385 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 CYTH2Q99418 400 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 CEP41Q9BYV8 373 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 SP110Q9HB58 689 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 PLAC1Q9HBJ0 212 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 ATP13A1Q9HD20 1204 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 TDP1Q9NUW8 608 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 MOCS1Q9NZB8 636 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 BFARQ9NZS9 450 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 CFAP97Q9P2B7 532 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 TBC1D14Q9P2M4 693 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 ZC3H7BQ9UGR2 993 aaKnown RBP12.08□□□□□ -0.48
GGA3-217ENST00000583667 SH3BP1Q9Y3L3 701 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 ACTL7BQ9Y614 415 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 USP9XQ93008 2570 aaPredicted RBP12.08□□□□□ -0.48
GGA3-217ENST00000583667 NUP205Q92621 2012 aa12.08□□□□□ -0.48
GGA3-217ENST00000583667 ASCC3Q8N3C0 2202 aaKnown RBP12.07□□□□□ -0.48
GGA3-217ENST00000583667 TYW5A2RUC4 315 aaKnown RBP12.07□□□□□ -0.48
GGA3-217ENST00000583667 J3QKU1 62 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 RGS16O15492 202 aaPredicted RBP12.07□□□□□ -0.48
GGA3-217ENST00000583667 ZMPSTE24O75844 475 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 LUC7L3O95232 432 aaKnown RBP12.07□□□□□ -0.48
GGA3-217ENST00000583667 APC2O95996 2303 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 HLA-DQB2P05538 268 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 RHOCP08134 193 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 IRF1P10914 325 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 GCAP28676 217 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 SSTR1P30872 391 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 STX2P32856 288 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 CTHP32929 405 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 ACVRL1P37023 503 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 AVPR1AP37288 418 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 GRIA1P42261 906 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 GEMIN4P57678 1058 aaKnown RBP12.07□□□□□ -0.48
GGA3-217ENST00000583667 NSUN2Q08J23 767 aaKnown RBP eCLIP12.07□□□□□ -0.48
GGA3-217ENST00000583667 CDH17Q12864 832 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 LBRQ14739 615 aaKnown RBP12.07□□□□□ -0.48
GGA3-217ENST00000583667 TEAD2Q15562 447 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 RALGPS1Q5JS13 557 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 ADGRD1Q6QNK2 874 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 KDELC1Q6UW63 502 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 KDM7AQ6ZMT4 941 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 PRPF39Q86UA1 669 aaKnown RBP12.07□□□□□ -0.48
GGA3-217ENST00000583667 TMEM135Q86UB9 458 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 RALGPS2Q86X27 583 aaPredicted RBP12.07□□□□□ -0.48
GGA3-217ENST00000583667 CIR1Q86X95 450 aaPredicted RBP12.07□□□□□ -0.48
GGA3-217ENST00000583667 ANKMY2Q8IV38 441 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 BBS5Q8N3I7 341 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 ZNF843Q8N446 348 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 CAMKK1Q8N5S9 505 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 FIBINQ8TAL6 211 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 FAM76AQ8TAV0 307 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 GSDMBQ8TAX9 411 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 ARRDC2Q8TBH0 407 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 PTCD2Q8WV60 388 aaKnown RBP12.07□□□□□ -0.48
GGA3-217ENST00000583667 USP13Q92995 863 aaPredicted RBP12.07□□□□□ -0.48
GGA3-217ENST00000583667 STAMBPL1Q96FJ0 436 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 IL22Q9GZX6 179 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 VPS37BQ9H9H4 285 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 KIF9Q9HAQ2 790 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 TRPV4Q9HBA0 871 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 POLR3BQ9NW08 1133 aaPredicted RBP12.07□□□□□ -0.48
GGA3-217ENST00000583667 PSD3Q9NYI0 1048 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 VPS18Q9P253 973 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 SEPT3Q9UH03 358 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 ADAM21Q9UKJ8 722 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 SLC8A2Q9UPR5 921 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 CHMP2BQ9UQN3 213 aa12.07□□□□□ -0.48
GGA3-217ENST00000583667 ACACAQ13085 2346 aa12.06□□□□□ -0.48
GGA3-217ENST00000583667 A0A0D9SEW6 157 aa12.06□□□□□ -0.48
GGA3-217ENST00000583667 FAM237BA0A1B0GVD1 139 aa12.06□□□□□ -0.48
GGA3-217ENST00000583667 LOC285095A0A1B0GVY8 99 aa12.06□□□□□ -0.48
GGA3-217ENST00000583667 EXOC1LA0A1B0GW35 172 aa12.06□□□□□ -0.48
GGA3-217ENST00000583667 TCRBV9S1A1TA0A576 114 aa12.06□□□□□ -0.48
GGA3-217ENST00000583667 BANF1O75531 89 aa12.06□□□□□ -0.48
GGA3-217ENST00000583667 CPP00450 1065 aa12.06□□□□□ -0.48
GGA3-217ENST00000583667 PGAM1P18669 254 aa12.06□□□□□ -0.48
GGA3-217ENST00000583667 SGSHP51688 502 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms