RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 SMYD2Q9NRG4 433 aa9.36□□□□□ -0.91
SS18-220ENST00000582092 DNMT3BQ9UBC3 853 aaKnown RBP9.36□□□□□ -0.91
SS18-220ENST00000582092 ZNF212Q9UDV6 495 aa9.36□□□□□ -0.91
SS18-220ENST00000582092 MID2Q9UJV3 735 aa9.36□□□□□ -0.91
SS18-220ENST00000582092 STOML2Q9UJZ1 356 aa9.36□□□□□ -0.91
SS18-220ENST00000582092 ANKRD6Q9Y2G4 727 aa9.36□□□□□ -0.91
SS18-220ENST00000582092 TTC24A2A3L6 582 aaPredicted RBP9.35□□□□□ -0.91
SS18-220ENST00000582092 STK25O00506 426 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 TPP1O14773 563 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 PAPSS2O95340 614 aaPredicted RBP9.35□□□□□ -0.91
SS18-220ENST00000582092 OLFM2O95897 454 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 PEX11BO96011 259 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 GSTA1P08263 222 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 SRFP11831 508 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 PMLP29590 882 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 CSKP41240 450 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 MAPK8P45983 427 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 LIMK2P53671 638 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 WDR4P57081 412 aaKnown RBP9.35□□□□□ -0.91
SS18-220ENST00000582092 PFKPQ01813 784 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 RAD51Q06609 339 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 SLC20A2Q08357 652 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 NSUN2Q08J23 767 aaKnown RBP eCLIP9.35□□□□□ -0.91
SS18-220ENST00000582092 IFT88Q13099 833 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 SLC12A1Q13621 1099 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 ITIH4Q14624 930 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 USP10Q14694 798 aaKnown RBP9.35□□□□□ -0.91
SS18-220ENST00000582092 SETDB1Q15047 1291 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 TEAD2Q15562 447 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 CNGA3Q16281 694 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 INSCQ1MX18 579 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 CCDC153Q494R4 210 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 INO80DQ53TQ3 878 aaPredicted RBP9.35□□□□□ -0.91
SS18-220ENST00000582092 RALGPS1Q5JS13 557 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 SIRPB2Q5JXA9 342 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 STXBP5Q5T5C0 1151 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 TSTD2Q5T7W7 516 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 KIAA0930Q6ICG6 404 aaPredicted RBP9.35□□□□□ -0.91
SS18-220ENST00000582092 MRNIPQ6NTE8 343 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 NEPROQ6NW34 567 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 ESRP1Q6NXG1 681 aaKnown RBP9.35□□□□□ -0.91
SS18-220ENST00000582092 FAM47EQ6ZV65 393 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 SPATA21Q7Z572 469 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 TMC8Q8IU68 726 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 BBS7Q8IWZ6 715 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 ARRDC2Q8TBH0 407 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 BRSK1Q8TDC3 778 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 MZB1Q8WU39 189 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 SCG3Q8WXD2 468 aaKnown RBP9.35□□□□□ -0.91
SS18-220ENST00000582092 ZNF75CPQ92670 426 aaPredicted RBP9.35□□□□□ -0.91
SS18-220ENST00000582092 FGF13Q92913 245 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 WBP2Q969T9 261 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 ACDQ96AP0 544 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 E2F7Q96AV8 911 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 FAM122AQ96E09 287 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 MYEOVQ96EZ4 313 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 TSPAN17Q96FV3 270 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 SHDQ96IW2 340 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 VPS39Q96JC1 886 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 ELMO2Q96JJ3 720 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 SCYL1Q96KG9 808 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 NUDCD1Q96RS6 583 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 AGAP2Q99490 1192 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 MGME1Q9BQP7 344 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 SLC46A2Q9BY10 475 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 ACE2Q9BYF1 805 aaPredicted RBP9.35□□□□□ -0.91
SS18-220ENST00000582092 TDP1Q9NUW8 608 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 FGFR1OP2Q9NVK5 253 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.35□□□□□ -0.91
SS18-220ENST00000582092 IL1RAPL1Q9NZN1 696 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 WNT16Q9UBV4 365 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 SLC25A13Q9UJS0 675 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 SLC39A10Q9ULF5 831 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 ARHGAP26Q9UNA1 814 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 SLC8A2Q9UPR5 921 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 PLLPQ9Y342 182 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 DOCK4Q8N1I0 1966 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 DENND4CQ5VZ89 1909 aa9.35□□□□□ -0.91
SS18-220ENST00000582092 ZNF318Q5VUA4 2279 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 ZDBF2Q9HCK1 2354 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 ZCWPW2A0A1B0GU75 182 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.34□□□□□ -0.91
SS18-220ENST00000582092 LOC285095A0A1B0GVY8 99 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 ANHXE9PGG2 379 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 GOLGA8TH3BQL2 631 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 BIRC5O15392 142 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 SLC7A4O43246 635 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 RFPL1O75677 317 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 TMCC1O94876 653 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 APOA4P06727 396 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 TAC1P20366 129 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 HOXD9P28356 352 aaPredicted RBP9.34□□□□□ -0.91
SS18-220ENST00000582092 MZF1P28698 734 aaPredicted RBP9.34□□□□□ -0.91
SS18-220ENST00000582092 CRABP2P29373 138 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 NNMTP40261 264 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 CCNFP41002 786 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 CHRNA4P43681 627 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 CD151P48509 253 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 SERPINB4P48594 390 aa9.34□□□□□ -0.91
SS18-220ENST00000582092 SGSHP51688 502 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms