RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 FATE1Q969F0 183 aa17.09■□□□□ 0.33
CDC42EP4-206ENST00000581014 NSMCE3Q96MG7 304 aa17.09■□□□□ 0.33
CDC42EP4-206ENST00000581014 MGME1Q9BQP7 344 aa17.09■□□□□ 0.33
CDC42EP4-206ENST00000581014 ZNF670Q9BS34 389 aa17.09■□□□□ 0.33
CDC42EP4-206ENST00000581014 WRAP53Q9BUR4 548 aaKnown RBP17.09■□□□□ 0.33
CDC42EP4-206ENST00000581014 DUSP23Q9BVJ7 150 aa17.09■□□□□ 0.33
CDC42EP4-206ENST00000581014 PACSIN1Q9BY11 444 aa17.09■□□□□ 0.33
CDC42EP4-206ENST00000581014 USP29Q9HBJ7 922 aa17.09■□□□□ 0.33
CDC42EP4-206ENST00000581014 MBNL1Q9NR56 388 aaKnown RBP17.09■□□□□ 0.33
CDC42EP4-206ENST00000581014 DNAJC28Q9NX36 388 aa17.09■□□□□ 0.33
CDC42EP4-206ENST00000581014 H3BM21 787 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 HTRA2O43464 458 aaPredicted RBP17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 MFAP3LO75121 409 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 SOCS5O75159 536 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 KRT7P08729 469 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 TPM1P09493 284 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 ALPPL2P10696 532 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 CKMT1AP12532 417 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 LIG3P49916 1009 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 SCNN1BP51168 640 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 EIF2B5Q13144 721 aaKnown RBP17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 DPYSL3Q14195 570 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 KRT81Q14533 505 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 LRRC14Q15048 493 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 PAFAH1B3Q15102 231 aaKnown RBP17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 WSCD2Q2TBF2 565 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 SARM1Q6SZW1 724 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 ATPAF2Q8N5M1 289 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 TEX26Q8N6G2 289 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 ZNF548Q8NEK5 533 aaPredicted RBP17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 BTN2A2Q8WVV5 523 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 FAF2Q96CS3 445 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 NUDCD1Q96RS6 583 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 DEF6Q9H4E7 631 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 KLF15Q9UIH9 416 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 MYLKQ15746 1914 aa17.08■□□□□ 0.32
CDC42EP4-206ENST00000581014 TMEM110-MUSTN1A8MSY1 372 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 TPP1O14773 563 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 AKR1B10O60218 316 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 MTA2O94776 668 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 CD48P09326 243 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 C6P13671 934 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 THOP1P52888 689 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 E2F1Q01094 437 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 RALGDSQ12967 914 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 ZNF235Q14590 738 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 TCEAL1Q15170 157 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 HS1BP3Q53T59 392 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 ZNF542PQ5EBM4 170 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 MACC1Q6ZN28 852 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 PROSER1Q86XN7 944 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 CNGA4Q8IV77 575 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 MAP7D3Q8IWC1 876 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 BBS5Q8N3I7 341 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 RNF214Q8ND24 703 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 PCDH19Q8TAB3 1148 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 NSMCE1Q8WV22 266 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 CCDC42Q96M95 316 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 CHP1Q99653 195 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 TDRD6O60522 2096 aaKnown RBP17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 ADAMTS20P59510 1910 aa17.07■□□□□ 0.32
CDC42EP4-206ENST00000581014 K7ESM1 405 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 TAF4O00268 1085 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 JUNDP17535 347 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 HNF1BP35680 557 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 ARHGAP25P42331 645 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 TAS2R40P59535 323 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 GALNT2Q10471 571 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 MMRN1Q13201 1228 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 TBX2Q13207 712 aaPredicted RBP17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 IRF4Q15306 451 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 ATP13A4Q4VNC1 1196 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 ANKRD20A8PQ5CZ79 823 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 MARC1Q5VT66 337 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 DPPA4Q7L190 304 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 VSIG1Q86XK7 387 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 PGBD5Q8N414 524 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 PDCD7Q8N8D1 485 aaKnown RBP17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 TSGA13Q96PP4 275 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 CCDC86Q9H6F5 360 aaKnown RBP17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 NHEJ1Q9H9Q4 299 aaPredicted RBP17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 NCKIPSDQ9NZQ3 722 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 SALL4Q9UJQ4 1053 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 INTUQ9ULD6 942 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 LAMA5O15230 3695 aa17.06■□□□□ 0.32
CDC42EP4-206ENST00000581014 LY6G6EA0A0G2JKS1 128 aa17.05■□□□□ 0.32
CDC42EP4-206ENST00000581014 TRABD2BA6NFA1 517 aa17.05■□□□□ 0.32
CDC42EP4-206ENST00000581014 ZNF487B1APH4 448 aa17.05■□□□□ 0.32
CDC42EP4-206ENST00000581014 AQP9O43315 295 aa17.05■□□□□ 0.32
CDC42EP4-206ENST00000581014 GP1BAP07359 652 aa17.05■□□□□ 0.32
CDC42EP4-206ENST00000581014 HOXC4P09017 264 aaPredicted RBP17.05■□□□□ 0.32
CDC42EP4-206ENST00000581014 GARSP41250 739 aaKnown RBP17.05■□□□□ 0.32
CDC42EP4-206ENST00000581014 SSR1P43307 286 aaKnown RBP17.05■□□□□ 0.32
CDC42EP4-206ENST00000581014 MMP13P45452 471 aa17.05■□□□□ 0.32
CDC42EP4-206ENST00000581014 ADKP55263 362 aaKnown RBP17.05■□□□□ 0.32
CDC42EP4-206ENST00000581014 MTM1Q13496 603 aa17.05■□□□□ 0.32
CDC42EP4-206ENST00000581014 CCDC157Q569K6 752 aa17.05■□□□□ 0.32
CDC42EP4-206ENST00000581014 NCBP2-AS2Q69YL0 99 aa17.05■□□□□ 0.32
CDC42EP4-206ENST00000581014 ALG1LQ6GMV1 187 aa17.05■□□□□ 0.32
CDC42EP4-206ENST00000581014 ZCCHC8Q6NZY4 707 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms