RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 PDCD6IPQ8WUM4 868 aaKnown RBP20.28■□□□□ 0.84
SMG8-204ENST00000580498 CENPTQ96BT3 561 aa20.28■□□□□ 0.84
SMG8-204ENST00000580498 NUDCD1Q96RS6 583 aa20.28■□□□□ 0.84
SMG8-204ENST00000580498 IL12RB2Q99665 862 aa20.28■□□□□ 0.84
SMG8-204ENST00000580498 NHEJ1Q9H9Q4 299 aaPredicted RBP20.28■□□□□ 0.84
SMG8-204ENST00000580498 GPR27Q9NS67 375 aa20.28■□□□□ 0.84
SMG8-204ENST00000580498 ZMIZ1Q9ULJ6 1067 aa20.28■□□□□ 0.84
SMG8-204ENST00000580498 DOLKQ9UPQ8 538 aa20.28■□□□□ 0.84
SMG8-204ENST00000580498 ANKRD36A6QL64 1941 aa20.27■□□□□ 0.84
SMG8-204ENST00000580498 SCAMP1O15126 338 aa20.27■□□□□ 0.84
SMG8-204ENST00000580498 SIGLEC6O43699 453 aa20.27■□□□□ 0.84
SMG8-204ENST00000580498 CYP2A6P11509 494 aaPredicted RBP20.27■□□□□ 0.84
SMG8-204ENST00000580498 CES1P23141 567 aa20.27■□□□□ 0.84
SMG8-204ENST00000580498 ACP1P24666 158 aa20.27■□□□□ 0.84
SMG8-204ENST00000580498 IGFALSP35858 605 aa20.27■□□□□ 0.84
SMG8-204ENST00000580498 MMP12P39900 470 aa20.27■□□□□ 0.84
SMG8-204ENST00000580498 RPIAP49247 311 aa20.27■□□□□ 0.84
SMG8-204ENST00000580498 LIG3P49916 1009 aa20.27■□□□□ 0.84
SMG8-204ENST00000580498 ITKQ08881 620 aa20.27■□□□□ 0.84
SMG8-204ENST00000580498 SLC10A7Q0GE19 358 aa20.27■□□□□ 0.84
SMG8-204ENST00000580498 MESDQ14696 234 aa20.27■□□□□ 0.84
SMG8-204ENST00000580498 FAXCQ5TGI0 409 aa20.27■□□□□ 0.84
SMG8-204ENST00000580498 KANSL1Q7Z3B3 1105 aa20.27■□□□□ 0.84
SMG8-204ENST00000580498 PDCD7Q8N8D1 485 aaKnown RBP20.27■□□□□ 0.84
SMG8-204ENST00000580498 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.27■□□□□ 0.84
SMG8-204ENST00000580498 SCG3Q8WXD2 468 aaKnown RBP20.27■□□□□ 0.84
SMG8-204ENST00000580498 MAK16Q9BXY0 300 aaKnown RBP20.27■□□□□ 0.84
SMG8-204ENST00000580498 APOBEC3BQ9UH17 382 aaKnown RBP20.27■□□□□ 0.84
SMG8-204ENST00000580498 PTPRBP23467 1997 aa20.26■□□□□ 0.83
SMG8-204ENST00000580498 SPINT1O43278 529 aa20.26■□□□□ 0.83
SMG8-204ENST00000580498 AQP9O43315 295 aa20.26■□□□□ 0.83
SMG8-204ENST00000580498 BUB1BO60566 1050 aaPredicted RBP20.26■□□□□ 0.83
SMG8-204ENST00000580498 CPP00450 1065 aa20.26■□□□□ 0.83
SMG8-204ENST00000580498 CTSEP14091 401 aa20.26■□□□□ 0.83
SMG8-204ENST00000580498 KELP23276 732 aa20.26■□□□□ 0.83
SMG8-204ENST00000580498 ADKP55263 362 aaKnown RBP20.26■□□□□ 0.83
SMG8-204ENST00000580498 PPARDQ03181 441 aa20.26■□□□□ 0.83
SMG8-204ENST00000580498 IRF4Q15306 451 aa20.26■□□□□ 0.83
SMG8-204ENST00000580498 IFI16Q16666 785 aaKnown RBP20.26■□□□□ 0.83
SMG8-204ENST00000580498 PROX2Q3B8N5 592 aa20.26■□□□□ 0.83
SMG8-204ENST00000580498 ZNF542PQ5EBM4 170 aa20.26■□□□□ 0.83
SMG8-204ENST00000580498 TXNRD3NBQ6F5E7 133 aa20.26■□□□□ 0.83
SMG8-204ENST00000580498 ZCCHC8Q6NZY4 707 aaKnown RBP20.26■□□□□ 0.83
SMG8-204ENST00000580498 SLC25A45Q8N413 288 aa20.26■□□□□ 0.83
SMG8-204ENST00000580498 ZNF548Q8NEK5 533 aaPredicted RBP20.26■□□□□ 0.83
SMG8-204ENST00000580498 LMX1AQ8TE12 382 aa20.26■□□□□ 0.83
SMG8-204ENST00000580498 TSC1Q92574 1164 aa20.26■□□□□ 0.83
SMG8-204ENST00000580498 TBATAQ96M53 351 aa20.26■□□□□ 0.83
SMG8-204ENST00000580498 MGME1Q9BQP7 344 aa20.26■□□□□ 0.83
SMG8-204ENST00000580498 TMEM121BQ9BXQ6 578 aaPredicted RBP20.26■□□□□ 0.83
SMG8-204ENST00000580498 SHROOM3Q8TF72 1996 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 EPG5Q9HCE0 2579 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 CACNB4O00305 520 aaPredicted RBP20.25■□□□□ 0.83
SMG8-204ENST00000580498 PDE2AO00408 941 aaPredicted RBP20.25■□□□□ 0.83
SMG8-204ENST00000580498 MAFKO60675 156 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 ANXA6P08133 673 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 RGRP47804 291 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 MTM1Q13496 603 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 DPYSL3Q14195 570 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 AGERQ15109 404 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 ANKRD20A8PQ5CZ79 823 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 DPPA4Q7L190 304 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 PHACTR4Q8IZ21 702 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 FSTL5Q8N475 847 aaPredicted RBP20.25■□□□□ 0.83
SMG8-204ENST00000580498 TP53I13Q8NBR0 393 aaPredicted RBP20.25■□□□□ 0.83
SMG8-204ENST00000580498 FAM71BQ8TC56 605 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 ECHDC3Q96DC8 303 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 POLR1EQ9GZS1 481 aaKnown RBP20.25■□□□□ 0.83
SMG8-204ENST00000580498 ABCG4Q9H172 646 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 ETNK2Q9NVF9 386 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 UCKL1Q9NWZ5 548 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 AMACRQ9UHK6 382 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 INTUQ9ULD6 942 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 PHTF1Q9UMS5 762 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 NENFQ9UMX5 172 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 COQ6Q9Y2Z9 468 aa20.25■□□□□ 0.83
SMG8-204ENST00000580498 GOLGA4Q13439 2230 aaKnown RBP20.25■□□□□ 0.83
SMG8-204ENST00000580498 TRIM38O00635 465 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 TPP1O14773 563 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 RASGRP1O95267 797 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 PCCBP05166 539 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 ALPIP09923 528 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 CKMT1AP12532 417 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 ITIH2P19823 946 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 GARSP41250 739 aaKnown RBP20.24■□□□□ 0.83
SMG8-204ENST00000580498 MMRN1Q13201 1228 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 ARHGEF7Q14155 803 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 ACOX1Q15067 660 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 PAFAH1B3Q15102 231 aaKnown RBP20.24■□□□□ 0.83
SMG8-204ENST00000580498 ELOCQ15369 112 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 ASTE1Q2TB18 679 aaPredicted RBP20.24■□□□□ 0.83
SMG8-204ENST00000580498 PRRT3Q5FWE3 981 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 ARMC12Q5T9G4 340 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 SARM1Q6SZW1 724 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 USP45Q70EL2 814 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 FAM181AQ8N9Y4 354 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 SLC35G2Q8TBE7 412 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 RFFLQ8WZ73 363 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 NXPE2Q96DL1 559 aa20.24■□□□□ 0.83
SMG8-204ENST00000580498 PACSIN1Q9BY11 444 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms