RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 FHL5Q5TD97 284 aa16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 ZNF658Q5TYW1 1059 aaPredicted RBP16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 SLC26A9Q7LBE3 791 aa16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 TEX19Q8NA77 164 aa16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 CCDC112Q8NEF3 446 aa16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 ARHGEF2Q92974 986 aaKnown RBP16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 SLC45A3Q96JT2 553 aa16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 TBCBQ99426 244 aa16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 TMEM168Q9H0V1 697 aa16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 GPN2Q9H9Y4 310 aaPredicted RBP16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 SLC39A1Q9NY26 324 aa16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 RRN3Q9NYV6 651 aa16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 DGKBQ9Y6T7 804 aa16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 ICE1Q9Y2F5 2266 aa16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 LRBAP50851 2863 aa16.41■□□□□ 0.22
CTDNEP1-211ENST00000575783 TMEM202A6NGA9 273 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 VPS4BO75351 444 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 F9P00740 461 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 NR1D1P20393 614 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 MPSTP25325 297 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 MAZP56270 477 aaKnown RBP16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 SEPT6Q14141 434 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 TMEM52BQ4KMG9 183 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 ARTNQ5T4W7 220 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 FOXR2Q6PJQ5 311 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 NRSN1Q8IZ57 195 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 UNC5BQ8IZJ1 945 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 NETO2Q8NC67 525 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 C1orf131Q8NDD1 294 aaKnown RBP16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 AGBL5Q8NDL9 886 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 CCL4L1Q8NHW4 92 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 KIAA1143Q96AT1 154 aaPredicted RBP16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 GOLPH3LQ9H4A5 285 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 MOSPD1Q9UJG1 213 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 STAP1Q9ULZ2 295 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 HPCAL4Q9UM19 191 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 VPS4AQ9UN37 437 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 SRPK3Q9UPE1 567 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 TP53TG5Q9Y2B4 290 aa16.4■□□□□ 0.22
CTDNEP1-211ENST00000575783 CELSR2Q9HCU4 2923 aa16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 A1L4Q6 167 aa16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 CD1CP29017 333 aa16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 CSTF2P33240 577 aaKnown RBP eCLIP16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 GEMIN4P57678 1058 aaKnown RBP16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 SNX16P57768 344 aa16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 RAD51Q06609 339 aa16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 CDC20Q12834 499 aa16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 ACBD5Q5T8D3 534 aaPredicted RBP16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 NKAIN2Q5VXU1 208 aa16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 C16orf46Q6P387 395 aa16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 FAM129CQ86XR2 697 aa16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 PLA2G15Q8NCC3 412 aa16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 OR56A4Q8NGH8 313 aa16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 HAPLN3Q96S86 360 aa16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 DDA1Q9BW61 102 aa16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 ASPSCR1Q9BZE9 553 aa16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 FGF22Q9HCT0 170 aa16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 NDFIP2Q9NV92 336 aa16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 DNAI1Q9UI46 699 aa16.39■□□□□ 0.21
CTDNEP1-211ENST00000575783 ZW10O43264 779 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 GNLYP22749 145 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 OAS2P29728 719 aaKnown RBP16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 ETFBP38117 255 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 LIG3P49916 1009 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 ELP6Q0PNE2 266 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 BIRC2Q13490 618 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 COBLL1Q53SF7 1204 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 DCAF12Q5T6F0 453 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 ATP1A1-AS1Q5TC04 95 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 RWDD4Q6NW29 188 aaKnown RBP16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 GJB7Q6PEY0 223 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 ZNF397Q8NF99 534 aaPredicted RBP16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 KIAA1524Q8TCG1 905 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 SSC4DQ8WTU2 575 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 NT5C3BQ969T7 300 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 FUBP1Q96AE4 644 aaKnown RBP16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 PGAP3Q96FM1 320 aaPredicted RBP16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 HMCESQ96FZ2 354 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 CCDC34Q96HJ3 373 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 CEP63Q96MT8 703 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 GDAP1L1Q96MZ0 367 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 SUDS3Q9H7L9 328 aaPredicted RBP16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 CYP4F12Q9HCS2 524 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 SPATS2LQ9NUQ6 558 aaKnown RBP16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 OCIAD1Q9NX40 245 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 DKK3Q9UBP4 350 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 PILRAQ9UKJ1 303 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 SDK2Q58EX2 2172 aa16.38■□□□□ 0.21
CTDNEP1-211ENST00000575783 CRYBG3Q68DQ2 2970 aa16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 LOC101059948A0A1B0GTJ6 334 aa16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 FAM170AA1A519 330 aa16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 EFCAB7A8K855 629 aa16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 BECN2A8MW95 431 aa16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 K7EM74 188 aa16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 CACNB4O00305 520 aaPredicted RBP16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 BUB1O43683 1085 aa16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 HSP90AA1P07900 732 aaKnown RBP16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 LIMK2P53671 638 aa16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 MTM1Q13496 603 aa16.37■□□□□ 0.21
CTDNEP1-211ENST00000575783 SLC25A52Q3SY17 297 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms