RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 LGI2Q8N0V4 545 aa16.39■□□□□ 0.21
POLR2A-201ENST00000572844 LRRC43Q8N309 656 aa16.39■□□□□ 0.21
POLR2A-201ENST00000572844 POU5F2Q8N7G0 328 aa16.39■□□□□ 0.21
POLR2A-201ENST00000572844 FBXO22Q8NEZ5 403 aa16.39■□□□□ 0.21
POLR2A-201ENST00000572844 GIPC2Q8TF65 315 aa16.39■□□□□ 0.21
POLR2A-201ENST00000572844 N4BP2L2Q92802 583 aaPredicted RBP16.39■□□□□ 0.21
POLR2A-201ENST00000572844 MYEOVQ96EZ4 313 aa16.39■□□□□ 0.21
POLR2A-201ENST00000572844 IFT43Q96FT9 208 aa16.39■□□□□ 0.21
POLR2A-201ENST00000572844 OLFM1Q99784 485 aa16.39■□□□□ 0.21
POLR2A-201ENST00000572844 HSFX1Q9UBD0 423 aa16.39■□□□□ 0.21
POLR2A-201ENST00000572844 ARHGAP26Q9UNA1 814 aa16.39■□□□□ 0.21
POLR2A-201ENST00000572844 VWA7Q9Y334 891 aa16.39■□□□□ 0.21
POLR2A-201ENST00000572844 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.38■□□□□ 0.21
POLR2A-201ENST00000572844 TBKBP1A7MCY6 615 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 E9PBE3 544 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 KLHL41O60662 606 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 TRPA1O75762 1119 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 THRAP10827 490 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 ATP6V1C1P21283 382 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 ETFBP38117 255 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 SLC11A2P49281 568 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 PRAMEP78395 509 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 GALNT1Q10472 559 aaPredicted RBP16.38■□□□□ 0.21
POLR2A-201ENST00000572844 ARHGEF6Q15052 776 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 ZRSR2Q15696 482 aaKnown RBP16.38■□□□□ 0.21
POLR2A-201ENST00000572844 ZNF789Q5FWF6 425 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 TAS1R1Q7RTX1 841 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 KIRREL3Q8IZU9 778 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 KDM1BQ8NB78 822 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 TXNDC5Q8NBS9 432 aaKnown RBP16.38■□□□□ 0.21
POLR2A-201ENST00000572844 HDAC10Q969S8 669 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 PLD4Q96BZ4 506 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 FAR2Q96K12 515 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 MGME1Q9BQP7 344 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 TRPC7Q9HCX4 862 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 MAN1C1Q9NR34 630 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 CDYLQ9Y232 598 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 TRPC5OSA6NMA1 111 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 MEI4A8MW99 385 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 HOXD9P28356 352 aaPredicted RBP16.38■□□□□ 0.21
POLR2A-201ENST00000572844 KCNQ1P51787 676 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 SATB1Q01826 763 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 GNA12Q03113 381 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 CSHL1Q14406 222 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 HERC3Q15034 1050 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 TCTN1Q2MV58 587 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 LSM12Q3MHD2 195 aaKnown RBP16.38■□□□□ 0.21
POLR2A-201ENST00000572844 C1orf146Q5VVC0 180 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 FAM45BPQ6NSW5 357 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 PRSS55Q6UWB4 352 aaPredicted RBP16.38■□□□□ 0.21
POLR2A-201ENST00000572844 TRIM67Q6ZTA4 783 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 TMEM173Q86WV6 379 aaPredicted RBP16.38■□□□□ 0.21
POLR2A-201ENST00000572844 SLC22A9Q8IVM8 553 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 RNF168Q8IYW5 571 aaPredicted RBP16.38■□□□□ 0.21
POLR2A-201ENST00000572844 FAM45AQ8TCE6 357 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 BRSK1Q8TDC3 778 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 BCL7CQ8WUZ0 217 aaPredicted RBP16.38■□□□□ 0.21
POLR2A-201ENST00000572844 DNAJC9Q8WXX5 260 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 ZNF333Q96JL9 665 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 MAELQ96JY0 434 aaKnown RBP16.38■□□□□ 0.21
POLR2A-201ENST00000572844 CLPTM1LQ96KA5 538 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 POPDC3Q9HBV1 291 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 MRGBPQ9NV56 204 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 HCSTQ9UBK5 93 aa16.38■□□□□ 0.21
POLR2A-201ENST00000572844 GBF1Q92538 1859 aa16.37■□□□□ 0.21
POLR2A-201ENST00000572844 RGSL1A5PLK6 1076 aa16.37■□□□□ 0.21
POLR2A-201ENST00000572844 MUSKO15146 869 aa16.37■□□□□ 0.21
POLR2A-201ENST00000572844 NVLO15381 856 aaKnown RBP16.37■□□□□ 0.21
POLR2A-201ENST00000572844 PARNO95453 639 aaKnown RBP16.37■□□□□ 0.21
POLR2A-201ENST00000572844 CXCL10P02778 98 aa16.37■□□□□ 0.21
POLR2A-201ENST00000572844 SERPINF2P08697 491 aa16.37■□□□□ 0.21
POLR2A-201ENST00000572844 ITGAXP20702 1163 aa16.37■□□□□ 0.21
POLR2A-201ENST00000572844 SLC6A4P31645 630 aa16.37■□□□□ 0.21
POLR2A-201ENST00000572844 ARSDP51689 593 aa16.37■□□□□ 0.21
POLR2A-201ENST00000572844 RFTN1Q14699 578 aaPredicted RBP16.37■□□□□ 0.21
POLR2A-201ENST00000572844 USP41Q3LFD5 358 aa16.37■□□□□ 0.21
POLR2A-201ENST00000572844 SH2D4BQ5SQS7 431 aa16.37■□□□□ 0.21
POLR2A-201ENST00000572844 LRRC74BQ6ZQY2 392 aa16.37■□□□□ 0.21
POLR2A-201ENST00000572844 PTAR1Q7Z6K3 402 aaPredicted RBP16.37■□□□□ 0.21
POLR2A-201ENST00000572844 ADGRG6Q86SQ4 1221 aa16.37■□□□□ 0.21
POLR2A-201ENST00000572844 OR6P1Q8NGX9 317 aa16.37■□□□□ 0.21
POLR2A-201ENST00000572844 RP9Q8TA86 221 aaKnown RBP16.37■□□□□ 0.21
POLR2A-201ENST00000572844 TRIB3Q96RU7 358 aa16.37■□□□□ 0.21
POLR2A-201ENST00000572844 NDNQ99608 321 aa16.37■□□□□ 0.21
POLR2A-201ENST00000572844 POMKQ9H5K3 350 aa16.37■□□□□ 0.21
POLR2A-201ENST00000572844 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.37■□□□□ 0.21
POLR2A-201ENST00000572844 SEPT3Q9UH03 358 aa16.37■□□□□ 0.21
POLR2A-201ENST00000572844 SSX2IPQ9Y2D8 614 aa16.37■□□□□ 0.21
POLR2A-201ENST00000572844 NT5C1B-RDH14C9J2C7 533 aa16.36■□□□□ 0.21
POLR2A-201ENST00000572844 H3BNC9 293 aa16.36■□□□□ 0.21
POLR2A-201ENST00000572844 LIN7AO14910 233 aaPredicted RBP16.36■□□□□ 0.21
POLR2A-201ENST00000572844 KDELR3O43731 214 aa16.36■□□□□ 0.21
POLR2A-201ENST00000572844 RPP40O75818 363 aaKnown RBP16.36■□□□□ 0.21
POLR2A-201ENST00000572844 IPO13O94829 963 aaKnown RBP16.36■□□□□ 0.21
POLR2A-201ENST00000572844 NDST3O95803 873 aa16.36■□□□□ 0.21
POLR2A-201ENST00000572844 OGNP20774 298 aaKnown RBP16.36■□□□□ 0.21
POLR2A-201ENST00000572844 PSMA3P25788 255 aa16.36■□□□□ 0.21
POLR2A-201ENST00000572844 PIK3R1P27986 724 aa16.36■□□□□ 0.21
POLR2A-201ENST00000572844 AP2B1P63010 937 aa16.36■□□□□ 0.21
POLR2A-201ENST00000572844 FRMD7Q6ZUT3 714 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms