RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 GPR161Q8N6U8 529 aaKnown RBP7.04□□□□□ -1.28
SMG6-209ENST00000571442 TMEM145Q8NBT3 493 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 SPATA22Q8NHS9 363 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 TFB1MQ8WVM0 346 aaKnown RBP7.04□□□□□ -1.28
SMG6-209ENST00000571442 PIH1D2Q8WWB5 315 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 ATG4AQ8WYN0 398 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 P3H4Q92791 437 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 FOXJ1Q92949 421 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 TADA1Q96BN2 335 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 PPP1R16AQ96I34 528 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 BMFQ96LC9 184 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 ZNF641Q96N77 438 aaPredicted RBP7.04□□□□□ -1.28
SMG6-209ENST00000571442 AGAP3Q96P47 875 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 TUBGCP5Q96RT8 1024 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 KLF6Q99612 283 aaPredicted RBP7.04□□□□□ -1.28
SMG6-209ENST00000571442 WRAP53Q9BUR4 548 aaKnown RBP7.04□□□□□ -1.28
SMG6-209ENST00000571442 OSBPL1AQ9BXW6 950 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 PCED1AQ9H1Q7 454 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 USP29Q9HBJ7 922 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 PREBQ9HCU5 417 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 DYRK4Q9NR20 520 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 VPS45Q9NRW7 570 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 SMARCAL1Q9NZC9 954 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 CHKBQ9Y259 395 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 EFR3BQ9Y2G0 817 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 TTLL3Q9Y4R7 772 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 RAI2Q9Y5P3 530 aa7.04□□□□□ -1.28
SMG6-209ENST00000571442 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.04□□□□□ -1.28
SMG6-209ENST00000571442 SCN8AQ9UQD0 1980 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 A0A1B0GTW7 788 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 POM121BA6NF01 834 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 NPIPB15A6NHN6 443 aaPredicted RBP7.03□□□□□ -1.28
SMG6-209ENST00000571442 PRR5-ARHGAP8B1AHC4 643 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 H7C0C1 242 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 PPP1R12AO14974 1030 aaPredicted RBP7.03□□□□□ -1.28
SMG6-209ENST00000571442 LRP3O75074 770 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 PAK4O96013 591 aaPredicted RBP7.03□□□□□ -1.28
SMG6-209ENST00000571442 CFIP05156 583 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 RBP3P10745 1247 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 ENGP17813 658 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 NFKB1P19838 968 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 SERPINA4P29622 427 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 IGFALSP35858 605 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 HSPA9P38646 679 aaKnown RBP7.03□□□□□ -1.28
SMG6-209ENST00000571442 MMP12P39900 470 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 ATP5OP48047 213 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 NR2C2P49116 596 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 EIF3EP60228 445 aaKnown RBP7.03□□□□□ -1.28
SMG6-209ENST00000571442 ARHGAP8P85298 464 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 RAD51Q06609 339 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 CCDC173Q0VFZ6 552 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 RPS6KA1Q15418 735 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 CNGA3Q16281 694 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 DUOXA1Q1HG43 343 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 KIF19Q2TAC6 998 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 TEX44Q53QW1 395 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 SLC45A4Q5BKX6 768 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 WDR45BQ5MNZ6 344 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 PRAMEF14Q5SWL7 426 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 KCTD16Q68DU8 428 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 KDELC1Q6UW63 502 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 GCNT7Q6ZNI0 430 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 MICALCLQ6ZW33 695 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 SPATS2Q86XZ4 545 aaKnown RBP7.03□□□□□ -1.28
SMG6-209ENST00000571442 SLC13A5Q86YT5 568 aaPredicted RBP7.03□□□□□ -1.28
SMG6-209ENST00000571442 SLC22A18ASQ8N1D0 253 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 UBL4BQ8N7F7 174 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 GLIS1Q8NBF1 620 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 SLC35B2Q8TB61 432 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 PDCD6IPQ8WUM4 868 aaKnown RBP7.03□□□□□ -1.28
SMG6-209ENST00000571442 NSMCE1Q8WV22 266 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 C1orf54Q8WWF1 131 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 HTR3CQ8WXA8 447 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 IMP4Q96G21 291 aaKnown RBP7.03□□□□□ -1.28
SMG6-209ENST00000571442 OXNAD1Q96HP4 312 aaPredicted RBP7.03□□□□□ -1.28
SMG6-209ENST00000571442 MS4A14Q96JA4 679 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 TEKT5Q96M29 485 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 TRIB3Q96RU7 358 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 RBM15Q96T37 977 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMG6-209ENST00000571442 MLPHQ9BV36 600 aaPredicted RBP7.03□□□□□ -1.28
SMG6-209ENST00000571442 C1QTNF2Q9BXJ5 285 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 TDRD1Q9BXT4 1180 aaKnown RBP7.03□□□□□ -1.28
SMG6-209ENST00000571442 POLR1EQ9GZS1 481 aaKnown RBP7.03□□□□□ -1.28
SMG6-209ENST00000571442 KDM4CQ9H3R0 1056 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 ATP13A3Q9H7F0 1226 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 GLOD4Q9HC38 313 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 MBNL1Q9NR56 388 aaKnown RBP7.03□□□□□ -1.28
SMG6-209ENST00000571442 DLL3Q9NYJ7 618 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 UBP1Q9NZI7 540 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 B4GALT6Q9UBX8 382 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 DNPEPQ9ULA0 475 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 PNMA8BQ9ULN7 279 aaPredicted RBP7.03□□□□□ -1.28
SMG6-209ENST00000571442 SLC6A14Q9UN76 642 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 PCDHB9Q9Y5E1 797 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 SNX11Q9Y5W9 270 aa7.03□□□□□ -1.28
SMG6-209ENST00000571442 TDRD6O60522 2096 aaKnown RBP7.03□□□□□ -1.28
SMG6-209ENST00000571442 LRP4O75096 1905 aa7.02□□□□□ -1.29
SMG6-209ENST00000571442 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.02□□□□□ -1.29
SMG6-209ENST00000571442 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.02□□□□□ -1.29
SMG6-209ENST00000571442 HACD1B0YJ81 288 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms