RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 MEI1Q5TIA1 1274 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 SLC9A4Q6AI14 798 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 C22orf39Q6P5X5 142 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 PRICKLE2Q7Z3G6 844 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 SLC35F6Q8N357 371 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 OXR1Q8N573 874 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 PLD5Q8N7P1 536 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 OR6K2Q8NGY2 324 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 FRS2Q8WU20 508 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 PTPRN2Q92932 1015 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 HES6Q96HZ4 224 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 ZNF578Q96N58 590 aaPredicted RBP13.48□□□□□ -0.25
CCDC40-205ENST00000571028 SCML1Q9UN30 329 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 HS3ST2Q9Y278 367 aa13.48□□□□□ -0.25
CCDC40-205ENST00000571028 COL5A1P20908 1838 aaPredicted RBP13.48□□□□□ -0.25
CCDC40-205ENST00000571028 PTPRQQ9UMZ3 2332 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 ATP9BO43861 1147 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 NEBLO76041 1014 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 TMCC1O94876 653 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 CD160O95971 181 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 GEMIN4P57678 1058 aaKnown RBP13.47□□□□□ -0.25
CCDC40-205ENST00000571028 E2F1Q01094 437 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 SLC20A2Q08357 652 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 FAM182AQ5T1J6 154 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 ATXN7L2Q5T6C5 722 aaPredicted RBP13.47□□□□□ -0.25
CCDC40-205ENST00000571028 C9orf64Q5T6V5 341 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 SEL1L2Q5TEA6 688 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 NCEH1Q6PIU2 408 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 USP30Q70CQ3 517 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 MMAAQ8IVH4 418 aaKnown RBP13.47□□□□□ -0.25
CCDC40-205ENST00000571028 LSMEM2Q8N112 164 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 CACTIN-AS1Q8N1I8 211 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.47□□□□□ -0.25
CCDC40-205ENST00000571028 DCBLD1Q8N8Z6 715 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 KDM1BQ8NB78 822 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 CHST14Q8NCH0 376 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 NSMCE1Q8WV22 266 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 KCNE4Q8WWG9 221 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 TRIM44Q96DX7 344 aaPredicted RBP13.47□□□□□ -0.25
CCDC40-205ENST00000571028 EXOC2Q96KP1 924 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 FAM118BQ9BPY3 351 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 ORAI3Q9BRQ5 295 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 HERPUD2Q9BSE4 406 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 CINPQ9BW66 212 aaPredicted RBP13.47□□□□□ -0.25
CCDC40-205ENST00000571028 OSBPL8Q9BZF1 889 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 SEMA4CQ9C0C4 833 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 FBXL12Q9NXK8 326 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 DTLQ9NZJ0 730 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 FARP1Q9Y4F1 1045 aaPredicted RBP13.47□□□□□ -0.25
CCDC40-205ENST00000571028 HEMK1Q9Y5R4 338 aaPredicted RBP13.47□□□□□ -0.25
CCDC40-205ENST00000571028 DOCK4Q8N1I0 1966 aa13.47□□□□□ -0.25
CCDC40-205ENST00000571028 ZSCAN5CA6NGD5 496 aaPredicted RBP13.46□□□□□ -0.25
CCDC40-205ENST00000571028 ZNF487B1APH4 448 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 KLK10O43240 276 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 MAFKO60675 156 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 IL1BP01584 269 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 PECAM1P16284 738 aaPredicted RBP13.46□□□□□ -0.25
CCDC40-205ENST00000571028 CXCR5P32302 372 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 GARSP41250 739 aaKnown RBP13.46□□□□□ -0.25
CCDC40-205ENST00000571028 PSMD8P48556 350 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 CLCN6P51797 869 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 COPS2P61201 443 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 INSM1Q01101 510 aaPredicted RBP13.46□□□□□ -0.25
CCDC40-205ENST00000571028 IL10RBQ08334 325 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 GALNT2Q10471 571 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 AP1B1Q10567 949 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 CYTH1Q15438 398 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 SHBQ15464 509 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 PPP2R5EQ16537 467 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 ZC3H18Q86VM9 953 aaKnown RBP13.46□□□□□ -0.25
CCDC40-205ENST00000571028 VSIG1Q86XK7 387 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 GRIN3AQ8TCU5 1115 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 OR8D1Q8WZ84 308 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 P3H4Q92791 437 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 MED8Q96G25 268 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 SERAC1Q96JX3 654 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 OMDQ99983 421 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 PABPC3Q9H361 631 aaKnown RBP13.46□□□□□ -0.25
CCDC40-205ENST00000571028 ZDHHC6Q9H6R6 413 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 PDFQ9HBH1 243 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 SEPT10Q9P0V9 454 aa13.46□□□□□ -0.25
CCDC40-205ENST00000571028 TMEM131Q92545 1883 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 TTC24A2A3L6 582 aaPredicted RBP13.45□□□□□ -0.26
CCDC40-205ENST00000571028 TARSL2A2RTX5 802 aaKnown RBP13.45□□□□□ -0.26
CCDC40-205ENST00000571028 GOLGA6L9A6NEM1 432 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 H7C0C1 242 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 KRIT1O00522 736 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 RNASEH2AO75792 299 aaKnown RBP13.45□□□□□ -0.26
CCDC40-205ENST00000571028 MT-CO3P00414 261 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 WNT1P04628 370 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 MPOP05164 745 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 MX2P20592 715 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 TGM2P21980 687 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 GKP32189 559 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 ATP5OP48047 213 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 CSRP3P50461 194 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 GNG11P61952 73 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 GABREP78334 506 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 DAB2P98082 770 aa13.45□□□□□ -0.26
CCDC40-205ENST00000571028 ITKQ08881 620 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms