RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 BMP2KLQ5H9B9 411 aa4.96□□□□□ -1.62
CHD9-220ENST00000569794 DNTTIP2Q5QJE6 756 aaKnown RBP4.96□□□□□ -1.62
CHD9-220ENST00000569794 FAM69AQ5T7M9 428 aa4.96□□□□□ -1.62
CHD9-220ENST00000569794 OTUD1Q5VV17 481 aaPredicted RBP4.96□□□□□ -1.62
CHD9-220ENST00000569794 CNSTQ6PJW8 725 aa4.96□□□□□ -1.62
CHD9-220ENST00000569794 IL27RAQ6UWB1 636 aa4.96□□□□□ -1.62
CHD9-220ENST00000569794 MCM10Q7L590 875 aa4.96□□□□□ -1.62
CHD9-220ENST00000569794 PXKQ7Z7A4 578 aa4.96□□□□□ -1.62
CHD9-220ENST00000569794 UNC45BQ8IWX7 931 aa4.96□□□□□ -1.62
CHD9-220ENST00000569794 TMCO5AQ8N6Q1 288 aa4.96□□□□□ -1.62
CHD9-220ENST00000569794 USP6NLQ92738 828 aa4.96□□□□□ -1.62
CHD9-220ENST00000569794 STAMQ92783 540 aa4.96□□□□□ -1.62
CHD9-220ENST00000569794 CENPTQ96BT3 561 aa4.96□□□□□ -1.62
CHD9-220ENST00000569794 SDCCAG3Q96C92 435 aa4.96□□□□□ -1.62
CHD9-220ENST00000569794 FNBP1Q96RU3 617 aa4.96□□□□□ -1.62
CHD9-220ENST00000569794 EDEM3Q9BZQ6 932 aa4.96□□□□□ -1.62
CHD9-220ENST00000569794 PCDHAC1Q9H158 963 aa4.96□□□□□ -1.62
CHD9-220ENST00000569794 RABEP2Q9H5N1 569 aa4.96□□□□□ -1.62
CHD9-220ENST00000569794 EPS8L2Q9H6S3 715 aa4.96□□□□□ -1.62
CHD9-220ENST00000569794 TBK1Q9UHD2 729 aa4.96□□□□□ -1.62
CHD9-220ENST00000569794 PSAT1Q9Y617 370 aa4.96□□□□□ -1.62
CHD9-220ENST00000569794 E7EVH7 732 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 ZSCAN9O15535 394 aaPredicted RBP4.95□□□□□ -1.62
CHD9-220ENST00000569794 KLK10O43240 276 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 SLC7A4O43246 635 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 TSPAN3O60637 253 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 GOSR1O95249 250 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 AFPP02771 609 aaKnown RBP4.95□□□□□ -1.62
CHD9-220ENST00000569794 ATP5BP06576 529 aaKnown RBP4.95□□□□□ -1.62
CHD9-220ENST00000569794 GGT5P36269 586 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 EIF2DP41214 584 aaKnown RBP4.95□□□□□ -1.62
CHD9-220ENST00000569794 HARS2P49590 506 aaKnown RBP4.95□□□□□ -1.62
CHD9-220ENST00000569794 TPD52P55327 224 aaPredicted RBP4.95□□□□□ -1.62
CHD9-220ENST00000569794 SEC61A1P61619 476 aaKnown RBP4.95□□□□□ -1.62
CHD9-220ENST00000569794 EEF1A2Q05639 463 aaKnown RBP4.95□□□□□ -1.62
CHD9-220ENST00000569794 DDR1Q08345 913 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 BAK1Q16611 211 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 FNBP1LQ5T0N5 605 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 MRNIPQ6NTE8 343 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 C16orf89Q6UX73 402 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 CREB3L2Q70SY1 520 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 RAB11FIP2Q7L804 512 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 SLFN11Q7Z7L1 901 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 ADSSL1Q8N142 457 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 SPC24Q8NBT2 197 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 ENGASEQ8NFI3 743 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 N4BP2L2Q92802 583 aaPredicted RBP4.95□□□□□ -1.62
CHD9-220ENST00000569794 HES6Q96HZ4 224 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 APOPT1Q96IL0 206 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 EIF3CQ99613 913 aaKnown RBP4.95□□□□□ -1.62
CHD9-220ENST00000569794 FSD1Q9BTV5 496 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 C2orf40Q9H1Z8 148 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 EPS15L1Q9UBC2 864 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 ZMYND8Q9ULU4 1186 aaPredicted RBP4.95□□□□□ -1.62
CHD9-220ENST00000569794 AGTPBP1Q9UPW5 1226 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 DERAQ9Y315 318 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 FLT1P17948 1338 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 PASKQ96RG2 1323 aa4.95□□□□□ -1.62
CHD9-220ENST00000569794 UBE2CO00762 179 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 SLC16A5O15375 505 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 KCNQ3O43525 872 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 CNPP09543 421 aaKnown RBP4.94□□□□□ -1.62
CHD9-220ENST00000569794 NR2F1P10589 423 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 LAMP2P13473 410 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 PECAM1P16284 738 aaPredicted RBP4.94□□□□□ -1.62
CHD9-220ENST00000569794 EGR1P18146 543 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 HADHAP40939 763 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 RBM5P52756 815 aaKnown RBP eCLIP4.94□□□□□ -1.62
CHD9-220ENST00000569794 RARSP54136 660 aaKnown RBP4.94□□□□□ -1.62
CHD9-220ENST00000569794 DLX5P56178 289 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 SLC37A1P57057 533 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 SELENOVP59797 346 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 UBXN2AP68543 259 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 BFSP1Q12934 665 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 DCTN2Q13561 401 aaKnown RBP4.94□□□□□ -1.62
CHD9-220ENST00000569794 TRIM29Q14134 588 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 BTBD16Q32M84 506 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 ZNF672Q499Z4 452 aaPredicted RBP4.94□□□□□ -1.62
CHD9-220ENST00000569794 DUSP28Q4G0W2 176 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 GLIPR1L2Q4G1C9 344 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 ENTPD8Q5MY95 495 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 LCE1FQ5T754 118 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 IKBIPQ70UQ0 350 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 H1FNTQ75WM6 255 aaPredicted RBP4.94□□□□□ -1.62
CHD9-220ENST00000569794 GALNT7Q86SF2 657 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 TTC30AQ86WT1 665 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 THNSL1Q8IYQ7 743 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 CCDC43Q96MW1 224 aaKnown RBP4.94□□□□□ -1.62
CHD9-220ENST00000569794 PIGSQ96S52 555 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 WDR77Q9BQA1 342 aaPredicted RBP4.94□□□□□ -1.62
CHD9-220ENST00000569794 C1QTNF4Q9BXJ3 329 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 TWSG1Q9GZX9 223 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 SLC25A18Q9H1K4 315 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.94□□□□□ -1.62
CHD9-220ENST00000569794 DNAJC16Q9Y2G8 782 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 CLSPNQ9HAW4 1339 aa4.94□□□□□ -1.62
CHD9-220ENST00000569794 STX16-NPEPL1H3BU86 382 aa4.93□□□□□ -1.62
CHD9-220ENST00000569794 TAF4O00268 1085 aa4.93□□□□□ -1.62
CHD9-220ENST00000569794 SH2B2O14492 632 aaPredicted RBP4.93□□□□□ -1.62
CHD9-220ENST00000569794 STX16O14662 325 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms