RNA–Protein interactions for RNA: ENST00000569615.2

UTP4-215, Transcript of UTP4, small subunit processome component, human

TSL 3

Gene UTP4, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UTP4-215	ENST00000569615	FZD2	Q14332	565 aa		12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	AGER	Q15109	404 aa		12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	ASTE1	Q2TB18	679 aa	Predicted RBP	12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	LRRC73	Q5JTD7	316 aa		12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	SARM1	Q6SZW1	724 aa		12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	DHRS13	Q6UX07	377 aa		12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	MACC1	Q6ZN28	852 aa		12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	SLC25A45	Q8N413	288 aa		12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	PDCD7	Q8N8D1	485 aa	Known RBP	12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	FAM181A	Q8N9Y4	354 aa		12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	NETO2	Q8NC67	525 aa		12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	SCG3	Q8WXD2	468 aa	Known RBP	12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	TSC1	Q92574	1164 aa		12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	ECHDC3	Q96DC8	303 aa		12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	NUDCD1	Q96RS6	583 aa		12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	IL12RB2	Q99665	862 aa		12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	MGME1	Q9BQP7	344 aa		12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	TRIM5	Q9C035	493 aa		12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	CCDC86	Q9H6F5	360 aa	Known RBP	12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	AMACR	Q9UHK6	382 aa		12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	GGT7	Q9UJ14	662 aa		12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	INTU	Q9ULD6	942 aa		12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	NENF	Q9UMX5	172 aa		12.82	□□□□□ -0.36
UTP4-215	ENST00000569615	DOCK9	Q9BZ29	2069 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	PDE2A	O00408	941 aa	Predicted RBP	12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	TPP1	O14773	563 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	SPINT1	O43278	529 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	AQP9	O43315	295 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	SIGLEC6	O43699	453 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	BUB1B	O60566	1050 aa	Predicted RBP	12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	MAFK	O60675	156 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	CYP2A6	P11509	494 aa	Predicted RBP	12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	KEL	P23276	732 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	SLC1A1	P43005	524 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	RPIA	P49247	311 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	LIG3	P49916	1009 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	PPARD	Q03181	441 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	DNAJC3	Q13217	504 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	MTM1	Q13496	603 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	IFI16	Q16666	785 aa	Known RBP	12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	PROX2	Q3B8N5	592 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	TXNRD3NB	Q6F5E7	133 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	ZCCHC8	Q6NZY4	707 aa	Known RBP	12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	ARHGAP36	Q6ZRI8	547 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	VSIG1	Q86XK7	387 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	CACTIN-AS1	Q8N1I8	211 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	SDR16C5	Q8N3Y7	309 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	ZNF548	Q8NEK5	533 aa	Predicted RBP	12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	RFFL	Q8WZ73	363 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	FATE1	Q969F0	183 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	VOPP1	Q96AW1	172 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	POLR1E	Q9GZS1	481 aa	Known RBP	12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	ETNK2	Q9NVF9	386 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	APOBEC3B	Q9UH17	382 aa	Known RBP	12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	ZMIZ1	Q9ULJ6	1067 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	GOLGA4	Q13439	2230 aa	Known RBP	12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	IGF2R	P11717	2491 aa		12.81	□□□□□ -0.36
UTP4-215	ENST00000569615	ZNF487	B1APH4	448 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	CACNB4	O00305	520 aa	Predicted RBP	12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	TRIM38	O00635	465 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	TRAFD1	O14545	582 aa	Predicted RBP	12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	FFAR2	O15552	330 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	GP1BA	P07359	652 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	ALPI	P09923	528 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	CKMT1A	P12532	417 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	ZFX	P17010	805 aa	Predicted RBP	12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	IGFALS	P35858	605 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	GARS	P41250	739 aa	Known RBP	12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	RGR	P47804	291 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	ADK	P55263	362 aa	Known RBP	12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	ITK	Q08881	620 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	DPYSL3	Q14195	570 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	MESD	Q14696	234 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	PAFAH1B3	Q15102	231 aa	Known RBP	12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	IRF4	Q15306	451 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	ELOC	Q15369	112 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	ANKRD20A8P	Q5CZ79	823 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	FAXC	Q5TGI0	409 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	USP45	Q70EL2	814 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	DPPA4	Q7L190	304 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	FSTL5	Q8N475	847 aa	Predicted RBP	12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	TP53I13	Q8NBR0	393 aa	Predicted RBP	12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	SLC35G2	Q8TBE7	412 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	LMX1A	Q8TE12	382 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	PDCD6IP	Q8WUM4	868 aa	Known RBP	12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	MAK16	Q9BXY0	300 aa	Known RBP	12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	SALL4	Q9UJQ4	1053 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	DNPEP	Q9ULA0	475 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	PHTF1	Q9UMS5	762 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	DOLK	Q9UPQ8	538 aa		12.8	□□□□□ -0.36
UTP4-215	ENST00000569615	ARID1B	Q8NFD5	2236 aa	Predicted RBP	12.79	□□□□□ -0.36
UTP4-215	ENST00000569615		K7ESM1	405 aa		12.79	□□□□□ -0.36
UTP4-215	ENST00000569615	MATN3	O15232	486 aa		12.79	□□□□□ -0.36
UTP4-215	ENST00000569615	HTRA2	O43464	458 aa	Predicted RBP	12.79	□□□□□ -0.36
UTP4-215	ENST00000569615	MTA2	O94776	668 aa		12.79	□□□□□ -0.36
UTP4-215	ENST00000569615	RASGRP1	O95267	797 aa		12.79	□□□□□ -0.36
UTP4-215	ENST00000569615	IPO7	O95373	1038 aa	Known RBP	12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms