RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 KPNA2P52292 529 aaKnown RBP18.23■□□□□ 0.51
SMPD3-211ENST00000568373 WDR5P61964 334 aaKnown RBP18.23■□□□□ 0.51
SMPD3-211ENST00000568373 CXorf57Q6NSI4 855 aaKnown RBP18.23■□□□□ 0.51
SMPD3-211ENST00000568373 RINLQ6ZS11 566 aa18.23■□□□□ 0.51
SMPD3-211ENST00000568373 SPATA6LQ8N4H0 392 aa18.23■□□□□ 0.51
SMPD3-211ENST00000568373 TSPAN17Q96FV3 270 aa18.23■□□□□ 0.51
SMPD3-211ENST00000568373 ZFRQ96KR1 1074 aaKnown RBP18.23■□□□□ 0.51
SMPD3-211ENST00000568373 TBATAQ96M53 351 aa18.23■□□□□ 0.51
SMPD3-211ENST00000568373 MRPL57Q9BQC6 102 aaKnown RBP18.23■□□□□ 0.51
SMPD3-211ENST00000568373 MRPL46Q9H2W6 279 aaKnown RBP18.23■□□□□ 0.51
SMPD3-211ENST00000568373 MRPL17Q9NRX2 175 aaKnown RBP18.23■□□□□ 0.51
SMPD3-211ENST00000568373 TAS2R1Q9NYW7 299 aa18.23■□□□□ 0.51
SMPD3-211ENST00000568373 MARCH4Q9P2E8 410 aaPredicted RBP18.23■□□□□ 0.51
SMPD3-211ENST00000568373 CBX4O00257 560 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 INSIG1O15503 277 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 S1PR4O95977 384 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 MYL4P12829 197 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 CSF2RAP15509 400 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 ITGB8P26012 769 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 USP4Q13107 963 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 C16orf59Q7L2K0 433 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 TTC8Q8TAM2 541 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 HEXDCQ8WVB3 486 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 DNAJC1Q96KC8 554 aaKnown RBP18.22■□□□□ 0.51
SMPD3-211ENST00000568373 IGSF5Q9NSI5 407 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.22■□□□□ 0.51
SMPD3-211ENST00000568373 RIMKLBQ9ULI2 386 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 OR51F1A6NGY5 319 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 GSC2O15499 205 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 DLX3O60479 287 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 LATS1O95835 1130 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 AOC1P19801 751 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 SCNN1BP51168 640 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 SMAD3P84022 425 aaKnown RBP18.22■□□□□ 0.51
SMPD3-211ENST00000568373 UBAP2LQ14157 1087 aaKnown RBP18.22■□□□□ 0.51
SMPD3-211ENST00000568373 RCN2Q14257 317 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 HECTD2Q5U5R9 776 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 RNF219Q5W0B1 726 aaPredicted RBP18.22■□□□□ 0.51
SMPD3-211ENST00000568373 LDB1Q86U70 411 aaPredicted RBP18.22■□□□□ 0.51
SMPD3-211ENST00000568373 PNPLA1Q8N8W4 532 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 TDRD5Q8NAT2 981 aaKnown RBP18.22■□□□□ 0.51
SMPD3-211ENST00000568373 AGAP11Q8TF27 550 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 EXOC2Q96KP1 924 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 NSMCE3Q96MG7 304 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 ILKAPQ9H0C8 392 aaPredicted RBP18.22■□□□□ 0.51
SMPD3-211ENST00000568373 MUC3BQ9H195 1237 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 SUDS3Q9H7L9 328 aaPredicted RBP18.22■□□□□ 0.51
SMPD3-211ENST00000568373 ZNF334Q9HCZ1 680 aaPredicted RBP18.22■□□□□ 0.51
SMPD3-211ENST00000568373 TAGLN3Q9UI15 199 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 MAFFQ9ULX9 164 aa18.22■□□□□ 0.51
SMPD3-211ENST00000568373 RPL26L1Q9UNX3 145 aaKnown RBP18.22■□□□□ 0.51
SMPD3-211ENST00000568373 PRR5-ARHGAP8B1AHC4 643 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 EFCAB14O75071 495 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 RPP40O75818 363 aaKnown RBP18.21■□□□□ 0.51
SMPD3-211ENST00000568373 C1RP00736 705 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 TIMP1P01033 207 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 F11P03951 625 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 CHRNGP07510 517 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 PIRTP0C851 137 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 NAGLUP54802 743 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 ARHGAP8P85298 464 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 CYTH1Q15438 398 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 FAM83EQ2M2I3 478 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 VWA5B1Q5TIE3 1220 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 TEX9Q8N6V9 391 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 ZNF333Q96JL9 665 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 SLC22A12Q96S37 553 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 CYP2S1Q96SQ9 504 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 COG4Q9H9E3 785 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 TRPC7Q9HCX4 862 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 SCUBE2Q9NQ36 999 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.21■□□□□ 0.51
SMPD3-211ENST00000568373 VWA7Q9Y334 891 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 RAP2CQ9Y3L5 183 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 ARIH1Q9Y4X5 557 aaPredicted RBP18.21■□□□□ 0.51
SMPD3-211ENST00000568373 TEX28O15482 410 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 BUD23O43709 281 aaKnown RBP18.21■□□□□ 0.51
SMPD3-211ENST00000568373 DIAPH2O60879 1101 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 GLP2RO95838 553 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 GOT2P00505 430 aaKnown RBP18.21■□□□□ 0.51
SMPD3-211ENST00000568373 CES1P23141 567 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 ASPHQ12797 758 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 ILF2Q12905 390 aaKnown RBP18.21■□□□□ 0.51
SMPD3-211ENST00000568373 CSHL1Q14406 222 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 PTPRCAPQ14761 206 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 LRRC26Q2I0M4 334 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 CFAP157Q5JU67 520 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 AGAP9Q5VTM2 703 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 EPGNQ6UW88 154 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 ZNF783Q6ZMS7 281 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 ITIH5Q86UX2 942 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 OR13C4Q8NGS5 318 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 GPR150Q8NGU9 434 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 UNKQ9C0B0 810 aaKnown RBP18.21■□□□□ 0.51
SMPD3-211ENST00000568373 IL21Q9HBE4 155 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 GPAMQ9HCL2 828 aa18.21■□□□□ 0.51
SMPD3-211ENST00000568373 LAMA2P24043 3122 aaKnown RBP18.21■□□□□ 0.5
SMPD3-211ENST00000568373 OBSL1O75147 1896 aa18.2■□□□□ 0.5
SMPD3-211ENST00000568373 CCDC162PA2VCL2 907 aa18.2■□□□□ 0.5
SMPD3-211ENST00000568373 CD3EAPO15446 510 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms