RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 PREBQ9HCU5 417 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 PAK5Q9P286 719 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 PCYOX1Q9UHG3 505 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 ZFR2Q9UPR6 939 aaKnown RBP18.1■□□□□ 0.49
COMMD4-222ENST00000568034 MRFAP1Q9Y605 127 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 GPR179Q6PRD1 2367 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 MYO15AQ9UKN7 3530 aa18.1■□□□□ 0.49
COMMD4-222ENST00000568034 CCDC188H7C350 402 aa18.09■□□□□ 0.49
COMMD4-222ENST00000568034 ANXA9O76027 345 aa18.09■□□□□ 0.49
COMMD4-222ENST00000568034 IGHV4-34P06331 123 aa18.09■□□□□ 0.49
COMMD4-222ENST00000568034 CA4P22748 312 aa18.09■□□□□ 0.49
COMMD4-222ENST00000568034 SUOXP51687 545 aa18.09■□□□□ 0.49
COMMD4-222ENST00000568034 RPL26P61254 145 aaKnown RBP18.09■□□□□ 0.49
COMMD4-222ENST00000568034 SEMG2Q02383 582 aa18.09■□□□□ 0.49
COMMD4-222ENST00000568034 RPL6Q02878 288 aaKnown RBP18.09■□□□□ 0.49
COMMD4-222ENST00000568034 CCDC15Q0P6D6 951 aa18.09■□□□□ 0.49
COMMD4-222ENST00000568034 OLIG2Q13516 323 aa18.09■□□□□ 0.49
COMMD4-222ENST00000568034 SEMA5AQ13591 1074 aa18.09■□□□□ 0.49
COMMD4-222ENST00000568034 ZC3H14Q6PJT7 736 aaKnown RBP18.09■□□□□ 0.49
COMMD4-222ENST00000568034 DPPA4Q7L190 304 aa18.09■□□□□ 0.49
COMMD4-222ENST00000568034 GSTA5Q7RTV2 222 aa18.09■□□□□ 0.49
COMMD4-222ENST00000568034 KDELC2Q7Z4H8 507 aa18.09■□□□□ 0.49
COMMD4-222ENST00000568034 C11orf74Q86VG3 221 aa18.09■□□□□ 0.49
COMMD4-222ENST00000568034 DEFB119Q8N690 84 aa18.09■□□□□ 0.49
COMMD4-222ENST00000568034 IPMKQ8NFU5 416 aa18.09■□□□□ 0.49
COMMD4-222ENST00000568034 KIF18AQ8NI77 898 aa18.09■□□□□ 0.49
COMMD4-222ENST00000568034 ETNK1Q9HBU6 452 aa18.09■□□□□ 0.49
COMMD4-222ENST00000568034 FAM86C1Q9NVL1 165 aa18.09■□□□□ 0.49
COMMD4-222ENST00000568034 B4GALT6Q9UBX8 382 aa18.09■□□□□ 0.49
COMMD4-222ENST00000568034 RPL26L1Q9UNX3 145 aaKnown RBP18.09■□□□□ 0.49
COMMD4-222ENST00000568034 ARIH1Q9Y4X5 557 aaPredicted RBP18.09■□□□□ 0.49
COMMD4-222ENST00000568034 TNRC6BQ9UPQ9 1833 aaKnown RBP18.09■□□□□ 0.49
COMMD4-222ENST00000568034 THADAQ6YHU6 1953 aa18.08■□□□□ 0.49
COMMD4-222ENST00000568034 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 A0A0J9YYE9 177 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 NPIPB15A6NHN6 443 aaPredicted RBP18.08■□□□□ 0.48
COMMD4-222ENST00000568034 FAM47DPA6NHR8 397 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 LRRC72A6NJI9 287 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 ESPNB1AK53 854 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 NDST3O95803 873 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 EPOP01588 193 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 TRBC1P01850 177 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 KRT14P02533 472 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 ALPIP09923 528 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 CTPS1P17812 591 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 LHCGRP22888 699 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 FDFT1P37268 417 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 CHRNA4P43681 627 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 GRIA4P48058 902 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 POLR2LP62875 67 aaKnown RBP18.08■□□□□ 0.48
COMMD4-222ENST00000568034 LMNB2Q03252 620 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 SIM2Q14190 667 aaPredicted RBP18.08■□□□□ 0.48
COMMD4-222ENST00000568034 PRPSAP1Q14558 356 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 TRIP13Q15645 432 aaPredicted RBP18.08■□□□□ 0.48
COMMD4-222ENST00000568034 TMEM52BQ4KMG9 183 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 TMEM259Q4ZIN3 620 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 SEL1L3Q68CR1 1132 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 KIAA0895LQ68EN5 471 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 TRIM69Q86WT6 500 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 KLHL7Q8IXQ5 586 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 TMEFF1Q8IYR6 380 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 CADM4Q8NFZ8 388 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 ATOH1Q92858 354 aaPredicted RBP18.08■□□□□ 0.48
COMMD4-222ENST00000568034 SCRN2Q96FV2 425 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 PPP1R2P1Q96PQ5 205 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 LYSMD1Q96S90 227 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 ORAI3Q9BRQ5 295 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 FICDQ9BVA6 458 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 PCED1AQ9H1Q7 454 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 EBF2Q9HAK2 575 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.08■□□□□ 0.48
COMMD4-222ENST00000568034 AAR2Q9Y312 384 aaKnown RBP18.08■□□□□ 0.48
COMMD4-222ENST00000568034 SDK1Q7Z5N4 2213 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 CEP192Q8TEP8 1941 aa18.08■□□□□ 0.48
COMMD4-222ENST00000568034 LRRK1Q38SD2 2015 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.07■□□□□ 0.48
COMMD4-222ENST00000568034 A0A0U1RQS6 177 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 A0A1W2PQU0 124 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 PRR23AA6NEV1 266 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 CAPN8A6NHC0 703 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 METTL12A8MUP2 240 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 ANKRD66B4E2M5 251 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 LATO43561 262 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 TSPAN6O43657 245 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 RNGTTO60942 597 aaKnown RBP18.07■□□□□ 0.48
COMMD4-222ENST00000568034 NDUFS2O75306 463 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 ECEL1O95672 775 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 AGTP01019 485 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 GM2AP17900 193 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 XPAP23025 273 aaPredicted RBP18.07■□□□□ 0.48
COMMD4-222ENST00000568034 NBL1P41271 181 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 PTGER3P43115 390 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 C2orf54Q08AI8 447 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 ELP6Q0PNE2 266 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 FGL2Q14314 439 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 SPARCL1Q14515 664 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 CDKN3Q16667 212 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 WHAMMP3Q1A5X7 153 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 ZNF284Q2VY69 593 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 SIRPB2Q5JXA9 342 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms