RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 LZTS3O60299 673 aaPredicted RBP16.86■□□□□ 0.29
USB1-211ENST00000565662 MFAP3LO75121 409 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 NEBLO76041 1014 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 PIGNO95427 931 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 ELFN1P0C7U0 828 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 CYP2A6P11509 494 aaPredicted RBP16.86■□□□□ 0.29
USB1-211ENST00000565662 CKMT1AP12532 417 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 C6P13671 934 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 SCNN1BP51168 640 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 CLDN2P57739 230 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 FGL2Q14314 439 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 FZD2Q14332 565 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 ODF2Q5BJF6 829 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 RAVER1Q8IY67 606 aaKnown RBP16.86■□□□□ 0.29
USB1-211ENST00000565662 KCTD6Q8NC69 237 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 GRAMD1AQ96CP6 724 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 POLR1EQ9GZS1 481 aaKnown RBP16.86■□□□□ 0.29
USB1-211ENST00000565662 PCDH12Q9NPG4 1184 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 SCUBE2Q9NQ36 999 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 APOBEC3BQ9UH17 382 aaKnown RBP16.86■□□□□ 0.29
USB1-211ENST00000565662 SALL4Q9UJQ4 1053 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 ZMIZ1Q9ULJ6 1067 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 ITM2BQ9Y287 266 aa16.86■□□□□ 0.29
USB1-211ENST00000565662 PSMD11O00231 422 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 RNF103O00237 685 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 SPINT1O43278 529 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 AQP9O43315 295 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 MAFKO60675 156 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 MMP20O60882 483 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 TOP3BO95985 862 aaKnown RBP16.85■□□□□ 0.29
USB1-211ENST00000565662 ALPIP09923 528 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 JUPP14923 745 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 JUNDP17535 347 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 SLC1A1P43005 524 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 MMP13P45452 471 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 PEX6Q13608 980 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 PAFAH1B3Q15102 231 aaKnown RBP16.85■□□□□ 0.29
USB1-211ENST00000565662 ELOCQ15369 112 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 IFI16Q16666 785 aaKnown RBP16.85■□□□□ 0.29
USB1-211ENST00000565662 PRAMEF14Q5SWL7 426 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 LVRNQ6Q4G3 990 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 SARM1Q6SZW1 724 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 DPPA4Q7L190 304 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 TP53I13Q8NBR0 393 aaPredicted RBP16.85■□□□□ 0.29
USB1-211ENST00000565662 ZNF548Q8NEK5 533 aaPredicted RBP16.85■□□□□ 0.29
USB1-211ENST00000565662 NAT6Q93015 286 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 CALR3Q96L12 384 aaKnown RBP16.85■□□□□ 0.29
USB1-211ENST00000565662 IL12RB2Q99665 862 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 CA5BQ9Y2D0 317 aa16.85■□□□□ 0.29
USB1-211ENST00000565662 KMT2BQ9UMN6 2715 aaPredicted RBP16.84■□□□□ 0.29
USB1-211ENST00000565662 HTRA2O43464 458 aaPredicted RBP16.84■□□□□ 0.29
USB1-211ENST00000565662 SIGLEC6O43699 453 aa16.84■□□□□ 0.29
USB1-211ENST00000565662 SDC3O75056 442 aa16.84■□□□□ 0.29
USB1-211ENST00000565662 PYGLP06737 847 aa16.84■□□□□ 0.29
USB1-211ENST00000565662 HOXC4P09017 264 aaPredicted RBP16.84■□□□□ 0.29
USB1-211ENST00000565662 ZFXP17010 805 aaPredicted RBP16.84■□□□□ 0.29
USB1-211ENST00000565662 AMPD1P23109 780 aa16.84■□□□□ 0.29
USB1-211ENST00000565662 IGFALSP35858 605 aa16.84■□□□□ 0.29
USB1-211ENST00000565662 PPARDQ03181 441 aa16.84■□□□□ 0.29
USB1-211ENST00000565662 ASTE1Q2TB18 679 aaPredicted RBP16.84■□□□□ 0.29
USB1-211ENST00000565662 ZFYVE27Q5T4F4 411 aa16.84■□□□□ 0.29
USB1-211ENST00000565662 DHRS13Q6UX07 377 aa16.84■□□□□ 0.29
USB1-211ENST00000565662 USP45Q70EL2 814 aa16.84■□□□□ 0.29
USB1-211ENST00000565662 PROSER1Q86XN7 944 aa16.84■□□□□ 0.29
USB1-211ENST00000565662 CAMK1DQ8IU85 385 aa16.84■□□□□ 0.29
USB1-211ENST00000565662 SLC25A45Q8N413 288 aa16.84■□□□□ 0.29
USB1-211ENST00000565662 OR6C4Q8NGE1 309 aa16.84■□□□□ 0.29
USB1-211ENST00000565662 VOPP1Q96AW1 172 aa16.84■□□□□ 0.29
USB1-211ENST00000565662 WRAP53Q9BUR4 548 aaKnown RBP16.84■□□□□ 0.29
USB1-211ENST00000565662 NRSN2Q9GZP1 204 aa16.84■□□□□ 0.29
USB1-211ENST00000565662 PHTF1Q9UMS5 762 aa16.84■□□□□ 0.29
USB1-211ENST00000565662 AKR1B15C9JRZ8 316 aaPredicted RBP16.83■□□□□ 0.28
USB1-211ENST00000565662 CACNB4O00305 520 aaPredicted RBP16.83■□□□□ 0.28
USB1-211ENST00000565662 TRAFD1O14545 582 aaPredicted RBP16.83■□□□□ 0.28
USB1-211ENST00000565662 RAD51BO15315 384 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 INSIG1O15503 277 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 MTA2O94776 668 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 RASGRP1O95267 797 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 CPP00450 1065 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 CCNCP24863 283 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 GARSP41250 739 aaKnown RBP16.83■□□□□ 0.28
USB1-211ENST00000565662 LIG3P49916 1009 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 KIAA1024LP59773 190 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 GALNT2Q10471 571 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 DPYSL3Q14195 570 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 NFATC4Q14934 902 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 IRF4Q15306 451 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 LRRC38Q5VT99 294 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 ALG1LQ6GMV1 187 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 BZW1Q7L1Q6 419 aaKnown RBP16.83■□□□□ 0.28
USB1-211ENST00000565662 PHACTR4Q8IZ21 702 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 TEX26Q8N6G2 289 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 FAF2Q96CS3 445 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 TSGA13Q96PP4 275 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 BRD8Q9H0E9 1235 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 NHEJ1Q9H9Q4 299 aaPredicted RBP16.83■□□□□ 0.28
USB1-211ENST00000565662 GGT7Q9UJ14 662 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 DOLKQ9UPQ8 538 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 USP24Q9UPU5 2620 aa16.83■□□□□ 0.28
USB1-211ENST00000565662 ARID1BQ8NFD5 2236 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms