RNA–Protein interactions for RNA: ENST00000565481.5

KIFC3-222, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-222	ENST00000565481	ETNK2	Q9NVF9	386 aa		11.74	□□□□□ -0.53
KIFC3-222	ENST00000565481	NCKIPSD	Q9NZQ3	722 aa		11.74	□□□□□ -0.53
KIFC3-222	ENST00000565481	MYO1A	Q9UBC5	1043 aa		11.74	□□□□□ -0.53
KIFC3-222	ENST00000565481	IPO11	Q9UI26	975 aa	Known RBP	11.74	□□□□□ -0.53
KIFC3-222	ENST00000565481	SALL4	Q9UJQ4	1053 aa		11.74	□□□□□ -0.53
KIFC3-222	ENST00000565481	CLCA2	Q9UQC9	943 aa		11.74	□□□□□ -0.53
KIFC3-222	ENST00000565481	ATP8A1	Q9Y2Q0	1164 aa		11.74	□□□□□ -0.53
KIFC3-222	ENST00000565481	KALRN	O60229	2985 aa		11.74	□□□□□ -0.53
KIFC3-222	ENST00000565481		A0A087X0T9	212 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	LMO7DN	F2Z398	122 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481		H3BRJ5	948 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	DFFA	O00273	331 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	TRAFD1	O14545	582 aa	Predicted RBP	11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	OPA1	O60313	960 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	GCAT	O75600	419 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	MT-CO3	P00414	261 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	GYPC	P04921	128 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	FAM228B	P0C875	321 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	RARA	P10276	462 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	CR2	P20023	1033 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	XPA	P23025	273 aa	Predicted RBP	11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	SERPINA4	P29622	427 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	HNRNPH3	P31942	346 aa	Known RBP	11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	EIF4A3	P38919	411 aa	Known RBP	11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	DUSP3	P51452	185 aa	Predicted RBP	11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	AP1S1	P61966	158 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	SLC25A11	Q02978	314 aa	Known RBP	11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	RALGDS	Q12967	914 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	LRRC14	Q15048	493 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	SMTNL2	Q2TAL5	461 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	TMCO4	Q5TGY1	634 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	TXNRD3NB	Q6F5E7	133 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	ERAP2	Q6P179	960 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	PHACTR4	Q8IZ21	702 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	RBFA	Q8N0V3	343 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	FAM71B	Q8TC56	605 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	CSPG4P5	Q96PW8	444 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	LRRC61	Q9BV99	259 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	CINP	Q9BW66	212 aa	Predicted RBP	11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	BOC	Q9BWV1	1114 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	THAP2	Q9H0W7	228 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	TCEAL2	Q9H3H9	227 aa	Predicted RBP	11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	EVA1B	Q9NVM1	165 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	SPAST	Q9UBP0	616 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	SEPT3	Q9UH03	358 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	APOBEC3B	Q9UH17	382 aa	Known RBP	11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	COQ6	Q9Y2Z9	468 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	CFAP46	Q8IYW2	2715 aa		11.73	□□□□□ -0.53
KIFC3-222	ENST00000565481	SCN8A	Q9UQD0	1980 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	EME2	A4GXA9	379 aa	Predicted RBP	11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	TMEM110-MUSTN1	A8MSY1	372 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	HTRA2	O43464	458 aa	Predicted RBP	11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	MAFK	O60675	156 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	MYF5	P13349	255 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	GM2A	P17900	193 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	AMPD1	P23109	780 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	HSPA9	P38646	679 aa	Known RBP	11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	ARL4A	P40617	200 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	LIG3	P49916	1009 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	RENBP	P51606	427 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	BCL2L1	Q07817	233 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	SLC10A7	Q0GE19	358 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	LBR	Q14739	615 aa	Known RBP	11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	DEFB133	Q30KQ1	61 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	ALKBH5	Q6P6C2	394 aa	Known RBP	11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	TMCO3	Q6UWJ1	677 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	DPPA4	Q7L190	304 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	SNIP1	Q8TAD8	396 aa	Known RBP	11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	LMX1A	Q8TE12	382 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	NUP85	Q9BW27	656 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	CLPB	Q9H078	707 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	PCDH18	Q9HCL0	1135 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	IP6K2	Q9UHH9	426 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	ANAPC7	Q9UJX3	599 aa		11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	LUC7L2	Q9Y383	392 aa	Known RBP	11.72	□□□□□ -0.53
KIFC3-222	ENST00000565481	AHCTF1	Q8WYP5	2266 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	GOLGA6L19	H0YKK7	550 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	TLX3	O43711	291 aa	Predicted RBP	11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	SOCS5	O75159	536 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	PRKCG	P05129	697 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	IL4R	P24394	825 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	SCNN1B	P51168	640 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	BLK	P51451	505 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	ARSE	P51690	589 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	HK3	P52790	923 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	POLR2L	P62875	67 aa	Known RBP	11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	PPARD	Q03181	441 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	MTM1	Q13496	603 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	INPP5A	Q14642	412 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	NFATC4	Q14934	902 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	COL28A1	Q2UY09	1125 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	PRRT3	Q5FWE3	981 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	C6orf132	Q5T0Z8	1188 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	CFAP58	Q5T655	872 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	C19orf48	Q6RUI8	117 aa		11.71	□□□□□ -0.53
KIFC3-222	ENST00000565481	LIPI	Q6XZB0	460 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms