RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 KANSL1LA0AUZ9 987 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 TRAFD1O14545 582 aaPredicted RBP13.01□□□□□ -0.33
SPG7-209ENST00000564047 EIF3HO15372 352 aaKnown RBP eCLIP13.01□□□□□ -0.33
SPG7-209ENST00000564047 RNF40O75150 1001 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 USP12O75317 370 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 NDST3O95803 873 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 ATXN1LP0C7T5 689 aaKnown RBP13.01□□□□□ -0.33
SPG7-209ENST00000564047 CHRNB1P11230 501 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 GKP32189 559 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 GRIA1P42261 906 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 MAGEA3P43357 314 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 CLCN5P51795 746 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 RPL26P61254 145 aaKnown RBP13.01□□□□□ -0.33
SPG7-209ENST00000564047 CDH17Q12864 832 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 CAMK2GQ13555 558 aaPredicted RBP13.01□□□□□ -0.33
SPG7-209ENST00000564047 LRRC32Q14392 662 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 SLC1A5Q15758 541 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 HIF1AQ16665 826 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 C2orf27AQ580R0 203 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 ARMC12Q5T9G4 340 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 DENND5AQ6IQ26 1287 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 GDPD4Q6W3E5 623 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 CENPUQ71F23 418 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 DSG4Q86SJ6 1040 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 CAMK1DQ8IU85 385 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 ZNF687Q8N1G0 1237 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 STK40Q8N2I9 435 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 IL17RCQ8NAC3 791 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 TMIEQ8NEW7 156 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 OR52K1Q8NGK4 314 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 HCAR2Q8TDS4 363 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 SPOCK2Q92563 424 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 CAVIN3Q969G5 261 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 RMDN1Q96DB5 314 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 ECHDC3Q96DC8 303 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 APOL2Q9BQE5 337 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 ADGRE3Q9BY15 652 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 SUV39H2Q9H5I1 410 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 ZDHHC6Q9H6R6 413 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 LTB4R2Q9NPC1 389 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 ZDHHC4Q9NPG8 344 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 RPL26L1Q9UNX3 145 aaKnown RBP13.01□□□□□ -0.33
SPG7-209ENST00000564047 CHKBQ9Y259 395 aa13.01□□□□□ -0.33
SPG7-209ENST00000564047 E7ESA3 106 aa13□□□□□ -0.33
SPG7-209ENST00000564047 SYNCRIPO60506 623 aaKnown RBP13□□□□□ -0.33
SPG7-209ENST00000564047 LEFTY1O75610 366 aa13□□□□□ -0.33
SPG7-209ENST00000564047 PGLSO95336 258 aa13□□□□□ -0.33
SPG7-209ENST00000564047 PIGNO95427 931 aa13□□□□□ -0.33
SPG7-209ENST00000564047 KLF8O95600 359 aaPredicted RBP13□□□□□ -0.33
SPG7-209ENST00000564047 PRLP01236 227 aa13□□□□□ -0.33
SPG7-209ENST00000564047 PRNPP04156 253 aa13□□□□□ -0.33
SPG7-209ENST00000564047 FGF1P05230 155 aa13□□□□□ -0.33
SPG7-209ENST00000564047 TARSP26639 723 aaKnown RBP13□□□□□ -0.33
SPG7-209ENST00000564047 WASP42768 502 aa13□□□□□ -0.33
SPG7-209ENST00000564047 CHRNA4P43681 627 aa13□□□□□ -0.33
SPG7-209ENST00000564047 NPY2RP49146 381 aa13□□□□□ -0.33
SPG7-209ENST00000564047 OLIG2Q13516 323 aa13□□□□□ -0.33
SPG7-209ENST00000564047 HSP90B2PQ58FF3 399 aa13□□□□□ -0.33
SPG7-209ENST00000564047 DNAJC21Q5F1R6 531 aaKnown RBP13□□□□□ -0.33
SPG7-209ENST00000564047 ARSIQ5FYB1 569 aa13□□□□□ -0.33
SPG7-209ENST00000564047 SIRPB2Q5JXA9 342 aa13□□□□□ -0.33
SPG7-209ENST00000564047 EOGTQ5NDL2 527 aa13□□□□□ -0.33
SPG7-209ENST00000564047 FNBP1LQ5T0N5 605 aa13□□□□□ -0.33
SPG7-209ENST00000564047 KDELC2Q7Z4H8 507 aa13□□□□□ -0.33
SPG7-209ENST00000564047 GSPT2Q8IYD1 628 aaKnown RBP13□□□□□ -0.33
SPG7-209ENST00000564047 SIX5Q8N196 739 aa13□□□□□ -0.33
SPG7-209ENST00000564047 SLC25A41Q8N5S1 370 aa13□□□□□ -0.33
SPG7-209ENST00000564047 DNAAF3Q8N9W5 541 aa13□□□□□ -0.33
SPG7-209ENST00000564047 LRRC39Q96DD0 335 aa13□□□□□ -0.33
SPG7-209ENST00000564047 PWWP2AQ96N64 755 aa13□□□□□ -0.33
SPG7-209ENST00000564047 FAM129BQ96TA1 746 aa13□□□□□ -0.33
SPG7-209ENST00000564047 FBRSQ9HAH7 460 aa13□□□□□ -0.33
SPG7-209ENST00000564047 PSD3Q9NYI0 1048 aa13□□□□□ -0.33
SPG7-209ENST00000564047 PPM1HQ9ULR3 514 aa13□□□□□ -0.33
SPG7-209ENST00000564047 PCDHB9Q9Y5E1 797 aa13□□□□□ -0.33
SPG7-209ENST00000564047 SPTBN2O15020 2390 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 TSPAN11A1L157 253 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 CHURC1-FNTBB4DL54 471 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 H3BQF6 201 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 ADAM23O75077 832 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 KRT37O76014 449 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 UGT2B4P06133 528 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 CTSLP07711 333 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 PDHA1P08559 390 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 FAM153BP0C7A2 387 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 HOXB2P14652 356 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 GRIA4P48058 902 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 POLR2LP62875 67 aaKnown RBP12.99□□□□□ -0.33
SPG7-209ENST00000564047 PDIA2Q13087 525 aaKnown RBP12.99□□□□□ -0.33
SPG7-209ENST00000564047 GALNT3Q14435 633 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 PUM1Q14671 1186 aaKnown RBP eCLIP12.99□□□□□ -0.33
SPG7-209ENST00000564047 STARD3Q14849 445 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 SLMAPQ14BN4 828 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 FAM153CQ494X1 144 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 ZNF805Q5CZA5 627 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 CFAP58Q5T655 872 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 ARMC3Q5W041 872 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 BRAT1Q6PJG6 821 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 RELL1Q8IUW5 271 aa12.99□□□□□ -0.33
SPG7-209ENST00000564047 TXNDC5Q8NBS9 432 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms