RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 ELP6Q0PNE2 266 aa16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 INPP5AQ14642 412 aa16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 NFATC4Q14934 902 aa16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 SYCP1Q15431 976 aa16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 UGP2Q16851 508 aa16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 KIAA1614Q5VZ46 1190 aa16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 INO80CQ6PI98 192 aaPredicted RBP16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 ENPP7Q6UWV6 458 aa16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 DNAAF5Q86Y56 855 aa16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 WDR48Q8TAF3 677 aa16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 HCAR2Q8TDS4 363 aa16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 MCEEQ96PE7 176 aa16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 FANCLQ9NW38 375 aa16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 GPATCH2LQ9NWQ4 482 aa16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 DAAM1Q9Y4D1 1078 aa16.94■□□□□ 0.3
HDGFL3-203ENST00000563404 A0A1W2PQM1 296 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 TMEM110-MUSTN1A8MSY1 372 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 EFSO43281 561 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 XPAP23025 273 aaPredicted RBP16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 MMP12P39900 470 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 LIG3P49916 1009 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 SUOXP51687 545 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 COPB1P53618 953 aaKnown RBP16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 SRP54P61011 504 aaKnown RBP16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 AGERQ15109 404 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 ELOCQ15369 112 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 FKBP15Q5T1M5 1219 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 DNAJC24Q6P3W2 148 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 LVRNQ6Q4G3 990 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 RD3Q7Z3Z2 195 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 CAMK1DQ8IU85 385 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 SFTPA2Q8IWL1 248 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 SDR16C5Q8N3Y7 309 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 ARL14Q8N4G2 192 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 PLA2G15Q8NCC3 412 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 FUBP1Q96AE4 644 aaKnown RBP16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 LIN37Q96GY3 246 aaPredicted RBP16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 CELF6Q96J87 481 aaKnown RBP16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 NCAPGQ9BPX3 1015 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 CATSPERBQ9H7T0 1116 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 UBA2Q9UBT2 640 aaPredicted RBP16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 GPR34Q9UPC5 381 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 DOLKQ9UPQ8 538 aa16.93■□□□□ 0.3
HDGFL3-203ENST00000563404 BSNQ9UPA5 3926 aa16.92■□□□□ 0.3
HDGFL3-203ENST00000563404 PRAMEF11O60813 436 aa16.92■□□□□ 0.3
HDGFL3-203ENST00000563404 RASGRP1O95267 797 aa16.92■□□□□ 0.3
HDGFL3-203ENST00000563404 PCCBP05166 539 aa16.92■□□□□ 0.3
HDGFL3-203ENST00000563404 ITGA2BP08514 1039 aa16.92■□□□□ 0.3
HDGFL3-203ENST00000563404 ALPIP09923 528 aa16.92■□□□□ 0.3
HDGFL3-203ENST00000563404 KRT10P13645 584 aa16.92■□□□□ 0.3
HDGFL3-203ENST00000563404 CTSEP14091 401 aa16.92■□□□□ 0.3
HDGFL3-203ENST00000563404 BLKP51451 505 aa16.92■□□□□ 0.3
HDGFL3-203ENST00000563404 CA9Q16790 459 aa16.92■□□□□ 0.3
HDGFL3-203ENST00000563404 CCDC97Q96F63 343 aaPredicted RBP16.92■□□□□ 0.3
HDGFL3-203ENST00000563404 PDXPQ96GD0 296 aa16.92■□□□□ 0.3
HDGFL3-203ENST00000563404 NSMCE3Q96MG7 304 aa16.92■□□□□ 0.3
HDGFL3-203ENST00000563404 AGPAT1Q99943 283 aa16.92■□□□□ 0.3
HDGFL3-203ENST00000563404 CNPY3Q9BT09 278 aa16.92■□□□□ 0.3
HDGFL3-203ENST00000563404 FOXP3Q9BZS1 431 aa16.92■□□□□ 0.3
HDGFL3-203ENST00000563404 SLC39A8Q9C0K1 460 aa16.92■□□□□ 0.3
HDGFL3-203ENST00000563404 SEPT11Q9NVA2 429 aaKnown RBP16.92■□□□□ 0.3
HDGFL3-203ENST00000563404 KLQ9UEF7 1012 aa16.92■□□□□ 0.3
HDGFL3-203ENST00000563404 COL6A6A6NMZ7 2263 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 D6RAR5 112 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 PLD2O14939 933 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 FGF10O15520 208 aaPredicted RBP16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 RPLP0P05388 317 aaKnown RBP16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 HGFP14210 728 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 GM2AP17900 193 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 PTMSP20962 102 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 UGT1A5P35504 534 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 MLLT3P42568 568 aaPredicted RBP16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 AIF1P55008 147 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 RALGDSQ12967 914 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 GKN2Q86XP6 184 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 MCOLN2Q8IZK6 566 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 TSEN2Q8NCE0 465 aaKnown RBP16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 GPR156Q8NFN8 814 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 NEK11Q8NG66 645 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 SCG3Q8WXD2 468 aaKnown RBP16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 OR1E3Q8WZA6 343 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 WDR92Q96MX6 357 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 ZNF641Q96N77 438 aaPredicted RBP16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 GFM1Q96RP9 751 aaKnown RBP16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 RBM15Q96T37 977 aaKnown RBP eCLIP16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 EPB41L5Q9HCM4 733 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 LMBRD1Q9NUN5 540 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 TAS2R14Q9NYV8 317 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 ATP8A1Q9Y2Q0 1164 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 PIEZO2Q9H5I5 2752 aa16.91■□□□□ 0.3
HDGFL3-203ENST00000563404 TMEM202A6NGA9 273 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 CAPN8A6NHC0 703 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 LGALS16A8MUM7 142 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 J3QKU1 62 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 NOBOXO60393 691 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 HTR1BP28222 390 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 SLC5A2P31639 672 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 PAPOLAP51003 745 aaKnown RBP16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 NDST2P52849 883 aa16.9■□□□□ 0.3
HDGFL3-203ENST00000563404 TPI1P60174 286 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms