RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 TBXAS1P24557 533 aaPredicted RBP7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 MAP4P27816 1152 aaKnown RBP7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 ACADSBP45954 432 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 MAZP56270 477 aaKnown RBP7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 SLC20A2Q08357 652 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 LRMPQ12912 555 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 SQSTM1Q13501 440 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 AGERQ15109 404 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 AMZ1Q400G9 498 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 DMRTA1Q5VZB9 504 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 RESP18Q5W5W9 173 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 C16orf46Q6P387 395 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 DENND1BQ6P3S1 775 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 IRF2BP1Q8IU81 584 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 AGBL5Q8NDL9 886 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 OR4D9Q8NGE8 314 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 OR6K2Q8NGY2 324 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 STK32AQ8WU08 396 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 KIAA1143Q96AT1 154 aaPredicted RBP7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 ISG20Q96AZ6 181 aaKnown RBP7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 ARHGEF26Q96DR7 871 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 PAGE5Q96GU1 130 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 WDR92Q96MX6 357 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 KLHL32Q96NJ5 620 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 HAPLN3Q96S86 360 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 EFHD1Q9BUP0 239 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 C1QTNF7Q9BXJ2 289 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 ASPSCR1Q9BZE9 553 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 TM6SF2Q9BZW4 377 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 TMEM168Q9H0V1 697 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 FAM204AQ9H8W3 233 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 CYP4F12Q9HCS2 524 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 FGF22Q9HCT0 170 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 MRPL40Q9NQ50 206 aaKnown RBP7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 ST7Q9NRC1 585 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 MPP6Q9NZW5 540 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 TMEM9Q9P0T7 183 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 PDP2Q9P2J9 529 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 HECAQ9UBI9 543 aaPredicted RBP7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 KLQ9UEF7 1012 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 TLK1Q9UKI8 766 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 OR1A2Q9Y585 309 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 SNX10Q9Y5X0 201 aa7.79□□□□□ -1.16
HERPUD1-206ENST00000563343 SYNJ2BP-COX16A0A087WUM0 186 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 ILVBLA1L0T0 632 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 STX10O60499 249 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 RHOBTB3O94955 611 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 YEATS4O95619 227 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 ADCY5O95622 1261 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 DLGAP3O95886 979 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 UGT2B4P06133 528 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 TIMP2P16035 220 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 RPL13P26373 211 aaKnown RBP7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 STAT5AP42229 794 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 DNA2P51530 1060 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 PMS2P54278 862 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 RAB15P59190 212 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 CDK17Q00537 523 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 MC2RQ01718 297 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 MC1RQ01726 317 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 MTA1Q13330 715 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 INPP5AQ14642 412 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 LRRC14Q15048 493 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 NADK2Q4G0N4 442 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 TMEM52BQ4KMG9 183 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 PRR30Q53SZ7 412 aaPredicted RBP7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 DCAF12Q5T6F0 453 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 NKAIN2Q5VXU1 208 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 RETSATQ6NUM9 610 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 ZNF783Q6ZMS7 281 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 TFAP2DQ7Z6R9 452 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 TAF8Q7Z7C8 310 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 TMEM135Q86UB9 458 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 NRROSQ86YC3 692 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 GUF1Q8N442 669 aaKnown RBP7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 LMO3Q8TAP4 145 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 TEFMQ96QE5 360 aaKnown RBP7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 SIK2Q9H0K1 926 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 APMAPQ9HDC9 416 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 SPATS2LQ9NUQ6 558 aaKnown RBP7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 ARHGEF38Q9NXL2 777 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 COX16Q9P0S2 106 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 MAPK8IP1Q9UQF2 711 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 PCDHB4Q9Y5E5 795 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 FBN3Q75N90 2809 aa7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 DIDO1Q9BTC0 2240 aaKnown RBP7.78□□□□□ -1.16
HERPUD1-206ENST00000563343 PCSK5Q92824 1860 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 IGHV1OR21-1A0A087WYE8 117 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 CXorf51AA0A1B0GTR3 108 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 PPP1R3GB7ZBB8 358 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 MAP3K7O43318 606 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 RFPL1O75677 317 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 FGF1P05230 155 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 GLI1P08151 1106 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 TFE3P19532 575 aaPredicted RBP7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 MPSTP25325 297 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 HTR1BP28222 390 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 ALDH4A1P30038 563 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 OR1E1P30953 314 aa7.77□□□□□ -1.17
HERPUD1-206ENST00000563343 CSTF2P33240 577 aaKnown RBP eCLIP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms