RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 SERAC1Q96JX3 654 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 ZNF830Q96NB3 372 aaPredicted RBP16.72■□□□□ 0.27
CDT1-202ENST00000562747 MGME1Q9BQP7 344 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 SCUBE2Q9NQ36 999 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 DTLQ9NZJ0 730 aa16.72■□□□□ 0.27
CDT1-202ENST00000562747 ZFR2Q9UPR6 939 aaKnown RBP16.72■□□□□ 0.27
CDT1-202ENST00000562747 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.71■□□□□ 0.27
CDT1-202ENST00000562747 PRAMEF26H0Y7S4 382 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 AREL1O15033 823 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 VILLO15195 856 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 MATN3O15232 486 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 TNFSF14O43557 240 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 CR2P20023 1033 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 CD38P28907 300 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 CDKN2BP42772 138 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 CCT8P50990 548 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 SCNN1BP51168 640 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 CLDN6P56747 220 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 BCL2L1Q07817 233 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 KIF5AQ12840 1032 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 SLC10A2Q12908 348 aaPredicted RBP16.71■□□□□ 0.27
CDT1-202ENST00000562747 TAZQ16635 292 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 ZNF284Q2VY69 593 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 TMEM259Q4ZIN3 620 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 CCDC157Q569K6 752 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 SLC45A4Q5BKX6 768 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 CFAP58Q5T655 872 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 MFSD7Q6UXD7 560 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 RFX6Q8HWS3 928 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 MAML1Q92585 1016 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 NUDCD1Q96RS6 583 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 DESI2Q9BSY9 194 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 AASDHPPTQ9NRN7 309 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 HAUS2Q9NVX0 235 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 AMACRQ9UHK6 382 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 SHROOM3Q8TF72 1996 aa16.71■□□□□ 0.27
CDT1-202ENST00000562747 A0A1W2PR77 199 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 NEMP1O14524 444 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 PCDHGA12O60330 932 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 ZRANB2O95218 330 aaKnown RBP eCLIP16.7■□□□□ 0.26
CDT1-202ENST00000562747 MAP3K6O95382 1288 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 TIMP2P16035 220 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 XPAP23025 273 aaPredicted RBP16.7■□□□□ 0.26
CDT1-202ENST00000562747 GRK6P43250 576 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 C21orf59P57076 290 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 OVGP1Q12889 678 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 TFDP2Q14188 446 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 SUZ12Q15022 739 aaKnown RBP16.7■□□□□ 0.26
CDT1-202ENST00000562747 SMAD1Q15797 465 aaKnown RBP16.7■□□□□ 0.26
CDT1-202ENST00000562747 DHRS13Q6UX07 377 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 SPOCD1Q6ZMY3 1216 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 IQCHQ86VS3 1027 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 CAMK1DQ8IU85 385 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 RCOR2Q8IZ40 523 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 PGBD5Q8N414 524 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 EXD1Q8NHP7 514 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 KIAA1524Q8TCG1 905 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 ECHDC3Q96DC8 303 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 RBM41Q96IZ5 413 aaKnown RBP16.7■□□□□ 0.26
CDT1-202ENST00000562747 GRPEL1Q9HAV7 217 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 HEY1Q9Y5J3 304 aa16.7■□□□□ 0.26
CDT1-202ENST00000562747 GOLGA4Q13439 2230 aaKnown RBP16.69■□□□□ 0.26
CDT1-202ENST00000562747 A0A1W2PQ67 120 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 SLC31A1O15431 190 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 ARHGAP6O43182 974 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 SPINT1O43278 529 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 MAGEC1O60732 1142 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 SOCS5O75159 536 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 HNRNPA2B1P22626 353 aaKnown RBP16.69■□□□□ 0.26
CDT1-202ENST00000562747 AKT2P31751 481 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 CTNNA1P35221 906 aaKnown RBP16.69■□□□□ 0.26
CDT1-202ENST00000562747 NR2C2P49116 596 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 PPIDQ08752 370 aaKnown RBP16.69■□□□□ 0.26
CDT1-202ENST00000562747 ELP6Q0PNE2 266 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 STAT4Q14765 748 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 PDK1Q15118 436 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 UGP2Q16851 508 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 TFDP3Q5H9I0 405 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 SEL1L3Q68CR1 1132 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 BZW1Q7L1Q6 419 aaKnown RBP16.69■□□□□ 0.26
CDT1-202ENST00000562747 GATAD2AQ86YP4 633 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 CCDC13Q8IYE1 715 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 GALNT15Q8N3T1 639 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 LRRC57Q8N9N7 239 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 MFSD2AQ8NA29 543 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 TMEM145Q8NBT3 493 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 CCNYQ8ND76 341 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 FAM174AQ8TBP5 190 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 ASB12Q8WXK4 309 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 SPOCK2Q92563 424 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 KRT35Q92764 455 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 SLC17A9Q9BYT1 436 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 POLR1EQ9GZS1 481 aaKnown RBP16.69■□□□□ 0.26
CDT1-202ENST00000562747 BRD8Q9H0E9 1235 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 NT5MQ9NPB1 228 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 PCDHA3Q9Y5H8 950 aa16.69■□□□□ 0.26
CDT1-202ENST00000562747 ANKRD36A6QL64 1941 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 CCDC66A2RUB6 948 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 GRID2IPA4D2P6 1211 aa16.68■□□□□ 0.26
CDT1-202ENST00000562747 GOLGA6L3A6NEY3 463 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms