RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 TAF5Q15542 800 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 SLC36A3Q495N2 470 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 CST9Q5W186 159 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 NXNQ6DKJ4 435 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 NPNTQ6UXI9 565 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 CCDC81Q6ZN84 652 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 ARFGAP1Q8N6T3 406 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 C18orf25Q96B23 403 aaPredicted RBP14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 PIWIL1Q96J94 861 aaKnown RBP14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 PARK7Q99497 189 aaKnown RBP14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 APBA2Q99767 749 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 ZBED2Q9BTP6 218 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 BCO2Q9BYV7 579 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 AKIP1Q9NQ31 210 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 THG1LQ9NWX6 298 aaKnown RBP14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 KLK14Q9P0G3 267 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 SUCOQ9UBS9 1254 aaKnown RBP14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 FBXO9Q9UK97 447 aaPredicted RBP14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 RNF103-CHMP3A0A140T963 221 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 E7ENX8 843 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 TAF4O00268 1085 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 PAPSS1O43252 624 aaPredicted RBP14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 ICMTO60725 284 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 BMP2P12643 396 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 IL1R2P27930 398 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 HOXA11P31270 313 aaPredicted RBP14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 HUNKP57058 714 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 PIGHQ14442 188 aaPredicted RBP14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 RFTN1Q14699 578 aaPredicted RBP14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 FAM110CQ1W6H9 321 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 SH3PXD2AQ5TCZ1 1133 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 CATSPER4Q7RTX7 472 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 ZFP90Q8TF47 636 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 TRIB2Q92519 343 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 PBXIP1Q96AQ6 731 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 ADPGKQ9BRR6 497 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 SATB2Q9UPW6 733 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 SCN4AP35499 1836 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 FAM149AA5PLN7 773 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 PHGDHO43175 533 aaKnown RBP14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 HOXC11O43248 304 aaPredicted RBP14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 ASNA1O43681 348 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 CILPO75339 1184 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 TADA2AO75478 443 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 MICAL2O94851 1124 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 CPNE6O95741 557 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 LSM8O95777 96 aaKnown RBP14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 FYNP06241 537 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 PRKCAP17252 672 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 KDELR1P24390 212 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 RGS7P49802 495 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 SMAD1Q15797 465 aaKnown RBP14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 FAM187BQ17R55 369 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 COLGALT2Q8IYK4 626 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 MPP5Q8N3R9 675 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 HCAR2Q8TDS4 363 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 ACMSDQ8TDX5 336 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 GTF3C2Q8WUA4 911 aaPredicted RBP14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 TMEM40Q8WWA1 233 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 DNAJB3Q8WWF6 145 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 MOCOSQ96EN8 888 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 TMEM176AQ96HP8 235 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 ACSS2Q9NR19 701 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 FAM49BQ9NUQ9 324 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 TCRBV3S1A0A5B6 114 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 TCAF2A6NFQ2 919 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 ZSCAN5BA6NJL1 495 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 UNCXA6NJT0 531 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 APOC4-APOC2K7ER74 178 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 M0QX08 132 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 SEC14L2O76054 403 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 APOC2P02655 101 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 PLCL1Q15111 1095 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 DCP2Q8IU60 420 aaKnown RBP14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 EMID1Q96A84 441 aaPredicted RBP14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 NXF3Q9H4D5 531 aaKnown RBP14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 HACD3Q9P035 362 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 PCDHGA8Q9Y5G5 932 aa14.11□□□□□ -0.15
GTF3C1-203ENST00000562609 B4GAT1O43505 415 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 SMIM10L2AP0DMW4 78 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 SMIM10L2BP0DMW5 78 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 CYP3A5P20815 502 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 MPSTP25325 297 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 ACADSBP45954 432 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 LEPRP48357 1165 aaKnown RBP14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 YWHAEP62258 255 aaKnown RBP14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 ZNF280DQ6N043 979 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 EPHX4Q8IUS5 362 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 LRRC49Q8IUZ0 686 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 ZCCHC7Q8N3Z6 543 aaKnown RBP14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 CANT1Q8WVQ1 401 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 HTRA1Q92743 480 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 TXNDC15Q96J42 360 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 CALN1Q9BXU9 219 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 LHPPQ9H008 270 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 ADAMTS10Q9H324 1103 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 ASB7Q9H672 318 aa14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 SOX17Q9H6I2 414 aaPredicted RBP14.1□□□□□ -0.15
GTF3C1-203ENST00000562609 ZBTB26Q9HCK0 441 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms