RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 PRAMEF11O60813 436 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 PRKCGP05129 697 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 MMP12P39900 470 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 RGRP47804 291 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 LIG3P49916 1009 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 BLKP51451 505 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 NDST2P52849 883 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 RP1P56715 2156 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 SPIDRQ14159 915 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 GRM3Q14832 879 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 NFATC4Q14934 902 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 AGERQ15109 404 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ELOCQ15369 112 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 CA9Q16790 459 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ESRP1Q6NXG1 681 aaKnown RBP16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 FOXR1Q6PIV2 292 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ENPP7Q6UWV6 458 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 CAMK1DQ8IU85 385 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 WDR48Q8TAF3 677 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 SNRNP27Q8WVK2 155 aaKnown RBP16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ZNF641Q96N77 438 aaPredicted RBP16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 SYT11Q9BT88 431 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 APOOQ9BUR5 198 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 EDEM3Q9BZQ6 932 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 SLC39A8Q9C0K1 460 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 HSD3B7Q9H2F3 369 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 SYNDIG1Q9H7V2 258 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 GULP1Q9UBP9 304 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 BOD1L1Q8NFC6 3051 aa16.83■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ANKRD36A6QL64 1941 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 SETXQ7Z333 2677 aaKnown RBP16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 LRRC10BA6NIK2 292 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 TMEM110-MUSTN1A8MSY1 372 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ALPIP09923 528 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 CTSEP14091 401 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 HTR7P34969 479 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 PAPOLAP51003 745 aaKnown RBP16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 MYL5Q02045 173 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 RHDQ02161 417 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 CFHR1Q03591 330 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ACAD10Q6JQN1 1059 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 DCUN1D2Q6PH85 259 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 BRAT1Q6PJG6 821 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 LVRNQ6Q4G3 990 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 RD3Q7Z3Z2 195 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 B3GNT8Q7Z7M8 397 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 CLEC14AQ86T13 490 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 PLA2G15Q8NCC3 412 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 WDR36Q8NI36 951 aaKnown RBP16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 CCDC74AQ96AQ1 378 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 AP4E1Q9UPM8 1137 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 DOLKQ9UPQ8 538 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ATP8A1Q9Y2Q0 1164 aa16.82■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ASH1LQ9NR48 2969 aaKnown RBP16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 CCDC187A0A096LP49 1063 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ATMINO43313 823 aaPredicted RBP16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 TNFSF15O95150 251 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 RASGRP1O95267 797 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 PCCBP05166 539 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 PLA2G2AP14555 144 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 HTR1BP28222 390 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 SRP54P61011 504 aaKnown RBP16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 VAC14Q08AM6 782 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 RALGDSQ12967 914 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 MAMLD1Q13495 774 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 NCAPHQ15003 741 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 TAF1BQ53T94 588 aaPredicted RBP16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 AFMIDQ63HM1 303 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ERAP2Q6P179 960 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 IRF2BP2Q7Z5L9 587 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ARL14Q8N4G2 192 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ARFGAP1Q8N6T3 406 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 TSEN2Q8NCE0 465 aaKnown RBP16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ANKRD20A12PQ8NF67 263 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 TTC9Q92623 222 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 PDXPQ96GD0 296 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 TUBGCP5Q96RT8 1024 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 PEBP4Q96S96 227 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 KLQ9UEF7 1012 aa16.81■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 A0A1W2PQM1 296 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 EEF2KO00418 725 aaKnown RBP16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 PALMO75781 387 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ITGA2BP08514 1039 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 FERP16591 822 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 CSNK1DP48730 415 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 MTM1Q13496 603 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 KIF26BQ2KJY2 2108 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 CFAP58Q5T655 872 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ARHGAP36Q6ZRI8 547 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 CYP4V2Q6ZWL3 525 aaPredicted RBP16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 SRLQ86TD4 932 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 GKN2Q86XP6 184 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ARHGAP12Q8IWW6 846 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 SDR16C5Q8N3Y7 309 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 NPWQ8N729 165 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 SCG3Q8WXD2 468 aaKnown RBP16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 FUBP1Q96AE4 644 aaKnown RBP16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 ECHDC3Q96DC8 303 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 WBP1Q96G27 269 aa16.8■□□□□ 0.28
VPS9D1-AS1-201ENST00000562298 LIN37Q96GY3 246 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms