RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 MBD3L5A6NJ08 208 aaPredicted RBP4.32□□□□□ -1.72
LRRC28-222ENST00000561431 TSPY2A6NKD2 308 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 STX16-NPEPL1H3BU86 382 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 STX16O14662 325 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 HNRNPRO43390 633 aaKnown RBP4.32□□□□□ -1.72
LRRC28-222ENST00000561431 BCAR3O75815 825 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 TFRCP02786 760 aaKnown RBP4.32□□□□□ -1.72
LRRC28-222ENST00000561431 TSPY3P0CV98 308 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 TSPY8P0CW00 308 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 BMP5P22003 454 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 IL4RP24394 825 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 ITPKBP27987 946 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 NDUFS1P28331 727 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 HOXD10P28358 340 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 KRT9P35527 623 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 PRPHP41219 470 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 PTH2RP49190 550 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 CDK7P50613 346 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 SH3BGRP55822 239 aaPredicted RBP4.32□□□□□ -1.72
LRRC28-222ENST00000561431 FAM3BP58499 235 aaPredicted RBP4.32□□□□□ -1.72
LRRC28-222ENST00000561431 TSPY1Q01534 308 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 GOLGA8FQ08AF8 430 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 LRRC74AQ0VAA2 488 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 KPNB1Q14974 876 aaKnown RBP4.32□□□□□ -1.72
LRRC28-222ENST00000561431 LARS2Q15031 903 aaKnown RBP4.32□□□□□ -1.72
LRRC28-222ENST00000561431 CCDC57Q2TAC2 916 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 CTXN3Q4LDR2 81 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 LRRC24Q50LG9 513 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 GLE1Q53GS7 698 aaKnown RBP4.32□□□□□ -1.72
LRRC28-222ENST00000561431 MFSD4BQ5TF39 518 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 PRAMEF17Q5VTA0 474 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 CST9Q5W186 159 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 GALNT17Q6IS24 598 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 DLK2Q6UY11 383 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 RANBP10Q6VN20 620 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 DSTYKQ6XUX3 929 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 KRT74Q7RTS7 529 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 NLRP14Q86W24 1093 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 GALNT13Q8IUC8 556 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 OR4N4Q8N0Y3 316 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 CERS5Q8N5B7 392 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 AGBL3Q8NEM8 1001 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 GSDMBQ8TAX9 411 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 STAMQ92783 540 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 KCNJ9Q92806 393 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 SARAFQ96BY9 339 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 AGAP3Q96P47 875 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 BBC3Q96PG8 261 aaPredicted RBP4.32□□□□□ -1.72
LRRC28-222ENST00000561431 MPHOSPH8Q99549 860 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 MEIS3Q99687 375 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 PI4K2AQ9BTU6 479 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 ABHD14AQ9BUJ0 271 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 HTATIP2Q9BUP3 242 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 RNF26Q9BY78 433 aaPredicted RBP4.32□□□□□ -1.72
LRRC28-222ENST00000561431 GLIS2Q9BZE0 524 aaPredicted RBP4.32□□□□□ -1.72
LRRC28-222ENST00000561431 API5Q9BZZ5 524 aaKnown RBP4.32□□□□□ -1.72
LRRC28-222ENST00000561431 COA1Q9GZY4 146 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 NUAK2Q9H093 628 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 CCDC68Q9H2F9 335 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 ZWILCHQ9H900 591 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 RMI1Q9H9A7 625 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 PDE11AQ9HCR9 933 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 G6PC2Q9NQR9 355 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 TMEM51Q9NW97 253 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 MTRRQ9UBK8 725 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 SLC25A13Q9UJS0 675 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 ADAM21Q9UKJ8 722 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 SUFUQ9UMX1 484 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 GPR34Q9UPC5 381 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 AGTPBP1Q9UPW5 1226 aa4.32□□□□□ -1.72
LRRC28-222ENST00000561431 TRPM7Q96QT4 1865 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 MROH5Q6ZUA9 1318 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 MYO3BQ8WXR4 1341 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 SYNJ2BP-COX16A0A087WUM0 186 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 MPHOSPH10O00566 681 aaKnown RBP4.31□□□□□ -1.72
LRRC28-222ENST00000561431 P4HA2O15460 535 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 USO1O60763 962 aaKnown RBP4.31□□□□□ -1.72
LRRC28-222ENST00000561431 HEXIM1O94992 359 aaKnown RBP4.31□□□□□ -1.72
LRRC28-222ENST00000561431 DNTTP04053 509 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 POLBP06746 335 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 CYP3A4P08684 503 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 CYP2D6P10635 497 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 P4HA1P13674 534 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 WT1P19544 449 aaPredicted RBP4.31□□□□□ -1.72
LRRC28-222ENST00000561431 PAX7P23759 505 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 CD86P42081 329 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 LIMK1P53667 647 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 KRTAP10-11P60412 298 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 UBE3AQ05086 875 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 SLC14A1Q13336 389 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 MTX1Q13505 466 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 SCARB2Q14108 478 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 DLGAP5Q15398 846 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 SMAD1Q15797 465 aaKnown RBP4.31□□□□□ -1.72
LRRC28-222ENST00000561431 MEA1Q16626 185 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 FAM110CQ1W6H9 321 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 C5orf22Q49AR2 442 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 SETMARQ53H47 684 aaPredicted RBP4.31□□□□□ -1.72
LRRC28-222ENST00000561431 AWAT1Q58HT5 328 aa4.31□□□□□ -1.72
LRRC28-222ENST00000561431 RUNDC3AQ59EK9 446 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms