RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 AGAP3Q96P47 875 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 WDR24Q96S15 920 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 NAP1L3Q99457 506 aaPredicted RBP9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 TDRD1Q9BXT4 1180 aaKnown RBP9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 VPS45Q9NRW7 570 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 ZFR2Q9UPR6 939 aaKnown RBP9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 RAI2Q9Y5P3 530 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 WDR87Q6ZQQ6 2873 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 LOC285095A0A1B0GVY8 99 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 ANKRD66B4E2M5 251 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 KCNN4O15554 427 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 FOXD2O60548 495 aaPredicted RBP9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 OPHN1O60890 802 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 RNGTTO60942 597 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 PDHA1P08559 390 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 ZNF806P0C7X5 589 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 TGM1P22735 817 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 ITPKAP23677 461 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 MMP12P39900 470 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 ETF1P62495 437 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 RPS21P63220 83 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 CREB5Q02930 508 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 MPP3Q13368 585 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 LPAL2Q16609 132 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 CYP1B1Q16678 543 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 LONRF2Q1L5Z9 754 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 ZNF284Q2VY69 593 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 CFAP58Q5T655 872 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 ITPRIPL1Q6GPH6 555 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 SLC23A3Q6PIS1 610 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 CYP2U1Q7Z449 544 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 NDUFAF2Q8N183 169 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 GPR161Q8N6U8 529 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 SPATA13Q96N96 652 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 PPP1R2P1Q96PQ5 205 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 LENG8Q96PV6 779 aaPredicted RBP9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 MCCC1Q96RQ3 725 aaPredicted RBP9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 TRIB3Q96RU7 358 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 LYSMD1Q96S90 227 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 NAPGQ99747 312 aaPredicted RBP9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 FAM118BQ9BPY3 351 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 C1QTNF2Q9BXJ5 285 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 CEP41Q9BYV8 373 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 ZFHX2Q9C0A1 2572 aaPredicted RBP9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 GBA3Q9H227 469 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 C10orf88Q9H8K7 445 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 EBF2Q9HAK2 575 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 PCDH9Q9HC56 1237 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 PCDH12Q9NPG4 1184 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 TMEM74BQ9NUR3 256 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 SEPT10Q9P0V9 454 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 KLHL8Q9P2G9 620 aaPredicted RBP9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 SUSD2Q9UGT4 822 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 EIF2B4Q9UI10 523 aaKnown RBP9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 GMEB2Q9UKD1 530 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 PLXNB3Q9ULL4 1909 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 PCDHB9Q9Y5E1 797 aa9.69□□□□□ -0.86
RABGGTA-221ENST00000561055 PTPRZ1P23471 2315 aaPredicted RBP9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 ASCC3Q8N3C0 2202 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 A0A0J9YYE9 177 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 A0A1B0GTW7 788 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 A0A1W2PQU0 124 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 CTAGE9A4FU28 777 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 FAM47DPA6NHR8 397 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 MEI4A8MW99 385 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 PRR5-ARHGAP8B1AHC4 643 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 PSMD11O00231 422 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 PGRMC1O00264 195 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 FANCGO15287 622 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 BCAT2O15382 392 aaPredicted RBP9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 ANXA9O76027 345 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 STK10O94804 968 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 FSBPO95073 299 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 PCDH8O95206 1070 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 CPP00450 1065 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 TRBC1P01850 177 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 NFKB1P19838 968 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 XPAP23025 273 aaPredicted RBP9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 MPLP40238 635 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 CD86P42081 329 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 GRIA4P48058 902 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 PPP2CBP62714 309 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 RACK1P63244 317 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 PPP2CAP67775 309 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 RALGDSQ12967 914 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 FGL2Q14314 439 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 CSRP2Q16527 193 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 DUOXA1Q1HG43 343 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 PARP6Q2NL67 630 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 P3H1Q32P28 736 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 SETMARQ53H47 684 aaPredicted RBP9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 ERAP2Q6P179 960 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 KDELC1Q6UW63 502 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 C4orf22Q6V702 233 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 LIPIQ6XZB0 460 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 NYAP1Q6ZVC0 841 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 DPPA4Q7L190 304 aa9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 ADAT2Q7Z6V5 191 aaKnown RBP9.68□□□□□ -0.86
RABGGTA-221ENST00000561055 DEFB119Q8N690 84 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms