RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 MLXIPLQ9NP71 852 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 DUS2Q9NX74 493 aaKnown RBP17.22■□□□□ 0.35
HDDC3-206ENST00000561036 DCDC2Q9UHG0 476 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 FBXO5Q9UKT4 447 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 PCDHGC4Q9Y5F7 938 aa17.22■□□□□ 0.35
HDDC3-206ENST00000561036 MYLKQ15746 1914 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 CCDC78A2IDD5 438 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 C2orf81A6NN90 581 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 K7ERQ8 282 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 SMAD6O43541 496 aaKnown RBP17.21■□□□□ 0.35
HDDC3-206ENST00000561036 GLRA3O75311 464 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 RPP40O75818 363 aaKnown RBP17.21■□□□□ 0.35
HDDC3-206ENST00000561036 PGLSO95336 258 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 AHSGP02765 367 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 TYK2P29597 1187 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 ETV4P43268 484 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 CD151P48509 253 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 PRAMEP78395 509 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 HYAL1Q12794 435 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 DHCR24Q15392 516 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 QPCTQ16769 361 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 EML3Q32P44 896 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 FAM78AQ5JUQ0 283 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 ATXN7L2Q5T6C5 722 aaPredicted RBP17.21■□□□□ 0.35
HDDC3-206ENST00000561036 ARMC12Q5T9G4 340 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 ASTLQ6HA08 431 aaPredicted RBP17.21■□□□□ 0.35
HDDC3-206ENST00000561036 ANKRD54Q6NXT1 300 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 LCA5Q86VQ0 697 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 AHI1Q8N157 1196 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 PCDH20Q8N6Y1 951 aaKnown RBP17.21■□□□□ 0.35
HDDC3-206ENST00000561036 LPCAT1Q8NF37 534 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 OR2AP1Q8NGE2 309 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 GPR150Q8NGU9 434 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 BPIFB1Q8TDL5 484 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 WFIKKN2Q8TEU8 576 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 FGF13Q92913 245 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 E2F7Q96AV8 911 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 LRRC3BQ96PB8 259 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 PAIP2Q9BPZ3 127 aaKnown RBP17.21■□□□□ 0.35
HDDC3-206ENST00000561036 IGFLR1Q9H665 355 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 ATP13A3Q9H7F0 1226 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 PCMTD2Q9NV79 361 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 NLE1Q9NVX2 485 aaPredicted RBP17.21■□□□□ 0.35
HDDC3-206ENST00000561036 GGT7Q9UJ14 662 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 GRID1Q9ULK0 1009 aa17.21■□□□□ 0.35
HDDC3-206ENST00000561036 MTO1Q9Y2Z2 717 aaKnown RBP17.21■□□□□ 0.35
HDDC3-206ENST00000561036 MYO7AQ13402 2215 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 TCP11X1B4DZS4 312 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 GOLGA8TH3BQL2 631 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 HTRA2O43464 458 aaPredicted RBP17.2■□□□□ 0.34
HDDC3-206ENST00000561036 ZNF821O75541 412 aaPredicted RBP17.2■□□□□ 0.34
HDDC3-206ENST00000561036 NFATC1O95644 943 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 GLP2RO95838 553 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 PDHA1P08559 390 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 VIMP08670 466 aaKnown RBP17.2■□□□□ 0.34
HDDC3-206ENST00000561036 TAC1P20366 129 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 LPOP22079 712 aaPredicted RBP17.2■□□□□ 0.34
HDDC3-206ENST00000561036 LEPRP48357 1165 aaKnown RBP17.2■□□□□ 0.34
HDDC3-206ENST00000561036 ZNF140P52738 457 aaPredicted RBP17.2■□□□□ 0.34
HDDC3-206ENST00000561036 ECT2LQ008S8 904 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 BCL2L1Q07817 233 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 PDE1CQ14123 709 aaPredicted RBP17.2■□□□□ 0.34
HDDC3-206ENST00000561036 GRM3Q14832 879 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 DBN1Q16643 649 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 ZSCAN26Q16670 478 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 ZNF470Q6ECI4 717 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 GLT6D1Q7Z4J2 308 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 ADIPOR2Q86V24 386 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 LRRC34Q8IZ02 419 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 TDHQ8IZJ6 230 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 HDAC10Q969S8 669 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 RSPRY1Q96DX4 576 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 MYO19Q96H55 970 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 CPEB1Q9BZB8 566 aaKnown RBP17.2■□□□□ 0.34
HDDC3-206ENST00000561036 SLC13A1Q9BZW2 595 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 MAGEE1Q9HCI5 957 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 SNX15Q9NRS6 342 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 THG1LQ9NWX6 298 aaKnown RBP17.2■□□□□ 0.34
HDDC3-206ENST00000561036 SLC17A7Q9P2U7 560 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 ANKRD6Q9Y2G4 727 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 SPO11Q9Y5K1 396 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 ARL5AQ9Y689 179 aa17.2■□□□□ 0.34
HDDC3-206ENST00000561036 TRAFD1O14545 582 aaPredicted RBP17.19■□□□□ 0.34
HDDC3-206ENST00000561036 ASLP04424 464 aa17.19■□□□□ 0.34
HDDC3-206ENST00000561036 CYP17A1P05093 508 aa17.19■□□□□ 0.34
HDDC3-206ENST00000561036 ADH5P11766 374 aa17.19■□□□□ 0.34
HDDC3-206ENST00000561036 POLR2EP19388 210 aaKnown RBP17.19■□□□□ 0.34
HDDC3-206ENST00000561036 GABRB3P28472 473 aa17.19■□□□□ 0.34
HDDC3-206ENST00000561036 SERPINA4P29622 427 aa17.19■□□□□ 0.34
HDDC3-206ENST00000561036 FOXN2P32314 431 aa17.19■□□□□ 0.34
HDDC3-206ENST00000561036 SLC1A2P43004 574 aa17.19■□□□□ 0.34
HDDC3-206ENST00000561036 CSRP3P50461 194 aa17.19■□□□□ 0.34
HDDC3-206ENST00000561036 CLCN5P51795 746 aa17.19■□□□□ 0.34
HDDC3-206ENST00000561036 DMTNQ08495 405 aa17.19■□□□□ 0.34
HDDC3-206ENST00000561036 PDGFRLQ15198 375 aa17.19■□□□□ 0.34
HDDC3-206ENST00000561036 SMAD1Q15797 465 aaKnown RBP17.19■□□□□ 0.34
HDDC3-206ENST00000561036 DGKKQ5KSL6 1271 aa17.19■□□□□ 0.34
HDDC3-206ENST00000561036 COL13A1Q5TAT6 717 aaPredicted RBP17.19■□□□□ 0.34
HDDC3-206ENST00000561036 MBLAC2Q68D91 279 aa17.19■□□□□ 0.34
HDDC3-206ENST00000561036 MRNIPQ6NTE8 343 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms