RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 SATB2Q9UPW6 733 aa10.24□□□□□ -0.77
SNRPA1-212ENST00000560496 ZFC3H1O60293 1989 aaKnown RBP10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 CPED1A4D0V7 1026 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 TMCO5BA8MYB1 307 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 EEF2KO00418 725 aaKnown RBP10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 MUSKO15146 869 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 ATXN7O15265 892 aaPredicted RBP10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 LRCH4O75427 683 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 TCEA3O75764 348 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 ERCC2P18074 760 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 PSMA2P25787 234 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 PAPOLAP51003 745 aaKnown RBP10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 SUOXP51687 545 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 HK3P52790 923 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 ADKP55263 362 aaKnown RBP10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 ERVPABLB-1P60509 514 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 DPYSQ14117 519 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 NFATC4Q14934 902 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 UGP2Q16851 508 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 DCUN1D2Q6PH85 259 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 BRAT1Q6PJG6 821 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 RFX8Q6ZV50 586 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 ZNF571Q7Z3V5 609 aaPredicted RBP10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 TP53INP2Q8IXH6 220 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 ZNF248Q8NDW4 579 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 PCDH19Q8TAB3 1148 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 HCAR2Q8TDS4 363 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 FNIP1Q8TF40 1166 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 VCPIP1Q96JH7 1222 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 TUBGCP5Q96RT8 1024 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 LGMNQ99538 433 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 IL12RB2Q99665 862 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 SUV39H2Q9H5I1 410 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 DHX35Q9H5Z1 703 aaKnown RBP10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 RTN4Q9NQC3 1192 aaKnown RBP10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 NCKIPSDQ9NZQ3 722 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 ATP8A1Q9Y2Q0 1164 aa10.23□□□□□ -0.77
SNRPA1-212ENST00000560496 TMEM191CA6NGB0 347 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 ARHGAP42A6NI28 874 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 EIF3CLB5ME19 914 aaKnown RBP10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 DDX3XO00571 662 aaKnown RBP eCLIP10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 NTN3O00634 580 aaPredicted RBP10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 TRAFD1O14545 582 aaPredicted RBP10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 YY2O15391 372 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 MBD3O95983 291 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 PCCBP05166 539 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 MIPP30301 263 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 PRKCIP41743 596 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 LSSP48449 732 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 CSNK1DP48730 415 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 LIG3P49916 1009 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 PEX5P50542 639 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 PPARDQ03181 441 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 MTM1Q13496 603 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 GRM3Q14832 879 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 LRRC14Q15048 493 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 TCEA2Q15560 299 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 ANO6Q4KMQ2 910 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 RBM44Q6ZP01 1051 aaKnown RBP10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 CAMK1DQ8IU85 385 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 PELI3Q8N2H9 469 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 ARL10Q8N8L6 244 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 PLA2G15Q8NCC3 412 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 NAT6Q93015 286 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 TSACCQ96A04 125 aaPredicted RBP10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 FUBP1Q96AE4 644 aaKnown RBP10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 ATXN7L3BQ96GX2 97 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 MS4A3Q96HJ5 214 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 NAF1Q96HR8 494 aaKnown RBP10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 ZNF641Q96N77 438 aaPredicted RBP10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 EIF3CQ99613 913 aaKnown RBP10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 CCDC3Q9BQI4 270 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 BPIFA3Q9BQP9 254 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 EDEM3Q9BZQ6 932 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 SLC13A1Q9BZW2 595 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 HAUS4Q9H6D7 363 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 PARVAQ9NVD7 372 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 OR1A2Q9Y585 309 aa10.22□□□□□ -0.77
SNRPA1-212ENST00000560496 HELZ2Q9BYK8 2649 aaKnown RBP10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 A0A1B0GTH6 734 aa10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 TEX51A0A1B0GUA7 166 aa10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 A0A1W2PQC6 194 aa10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 CDRT15L2A8MXV6 281 aa10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 PEX11BO96011 259 aa10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 ANXA6P08133 673 aa10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 CCDC172P0C7W6 258 aa10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 TCF4P15884 667 aa10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 DESP17661 470 aa10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 CDK11BP21127 795 aaKnown RBP10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 XPAP23025 273 aaPredicted RBP10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 IL1R2P27930 398 aa10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 SERPINA4P29622 427 aa10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 KIAA1024LP59773 190 aa10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 CXADRP78310 365 aa10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 INPP5AQ14642 412 aa10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 ELOCQ15369 112 aa10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 ASIC2Q16515 512 aa10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 ERMARDQ5T6L9 678 aa10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 FAXCQ5TGI0 409 aa10.21□□□□□ -0.77
SNRPA1-212ENST00000560496 PPP1R2P3Q6NXS1 205 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms