RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 ACSBG2Q5FVE4 666 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 TECRLQ5HYJ1 363 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 RALGPS1Q5JS13 557 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 RASIP1Q5U651 963 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 RAP1GAP2Q684P5 730 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 TPGS2Q68CL5 300 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 MRNIPQ6NTE8 343 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 RNF19BQ6ZMZ0 732 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 TMC7Q7Z402 723 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 MAVSQ7Z434 540 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 CILP2Q8IUL8 1156 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 APLFQ8IW19 511 aaPredicted RBP9.77□□□□□ -0.85
RTF1-206ENST00000560447 GPR65Q8IYL9 337 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 ULK2Q8IYT8 1036 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 RNF168Q8IYW5 571 aaPredicted RBP9.77□□□□□ -0.85
RTF1-206ENST00000560447 ZNF781Q8N8C0 355 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 PPFIBP2Q8ND30 876 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 DBF4BQ8NFT6 615 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 RP9Q8TA86 221 aaKnown RBP9.77□□□□□ -0.85
RTF1-206ENST00000560447 KCTD4Q8WVF5 259 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 IGSF8Q969P0 613 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 PSMG2Q969U7 264 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 IFT43Q96FT9 208 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 TRMT2BQ96GJ1 504 aaKnown RBP9.77□□□□□ -0.85
RTF1-206ENST00000560447 ATXN7L3BQ96GX2 97 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 ELMO2Q96JJ3 720 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 MAELQ96JY0 434 aaKnown RBP9.77□□□□□ -0.85
RTF1-206ENST00000560447 TCF12Q99081 682 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 MGME1Q9BQP7 344 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 CWH43Q9H720 699 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 CAB39LQ9H9S4 337 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 INTS10Q9NVR2 710 aaKnown RBP9.77□□□□□ -0.85
RTF1-206ENST00000560447 SEPT3Q9UH03 358 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 AFF4Q9UHB7 1163 aaKnown RBP9.77□□□□□ -0.85
RTF1-206ENST00000560447 BCAP29Q9UHQ4 241 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 VPS28Q9UK41 221 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 PRPF19Q9UMS4 504 aaKnown RBP9.77□□□□□ -0.85
RTF1-206ENST00000560447 ARHGAP26Q9UNA1 814 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 COL4A6Q14031 1691 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 PLXNA4Q9HCM2 1894 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 ILVBLA1L0T0 632 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 J3KR12 359 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 PHGDHO43175 533 aaKnown RBP9.76□□□□□ -0.85
RTF1-206ENST00000560447 KDELR3O43731 214 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 DLX3O60479 287 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 ENTPD5O75356 428 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 RPP40O75818 363 aaKnown RBP9.76□□□□□ -0.85
RTF1-206ENST00000560447 WISP3O95389 354 aaPredicted RBP9.76□□□□□ -0.85
RTF1-206ENST00000560447 PIGNO95427 931 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 VNN2O95498 520 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 NDST3O95803 873 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 ATXN1LP0C7T5 689 aaKnown RBP9.76□□□□□ -0.85
RTF1-206ENST00000560447 ATP6V1C1P21283 382 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 CD9P21926 228 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 OR1E1P30953 314 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 ARRB2P32121 409 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 ELF1P32519 619 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 SUOXP51687 545 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 AP2B1P63010 937 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 PRAMEP78395 509 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 MPP1Q00013 466 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 KDSRQ06136 332 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 KLF10Q13118 480 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 CTBP1Q13363 440 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 GPNMBQ14956 572 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 KPNB1Q14974 876 aaKnown RBP9.76□□□□□ -0.85
RTF1-206ENST00000560447 KHDC1Q4VXA5 237 aaKnown RBP9.76□□□□□ -0.85
RTF1-206ENST00000560447 ARL13AQ5H913 290 aaPredicted RBP9.76□□□□□ -0.85
RTF1-206ENST00000560447 SIRPB2Q5JXA9 342 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 RFWD3Q6PCD5 774 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 PGM2L1Q6PCE3 622 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 C16orf89Q6UX73 402 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 NAPRTQ6XQN6 538 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 TFAP2DQ7Z6R9 452 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 MYLK4Q86YV6 388 aaPredicted RBP9.76□□□□□ -0.85
RTF1-206ENST00000560447 DENND6AQ8IWF6 608 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 HOMEZQ8IX15 550 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 TNS4Q8IZW8 715 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 OR13J1Q8NGT2 312 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 BRSK1Q8TDC3 778 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 PABPC5Q96DU9 382 aaKnown RBP9.76□□□□□ -0.85
RTF1-206ENST00000560447 UBXN10Q96LJ8 280 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 MYRFLQ96LU7 910 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 FAM161BQ96MY7 647 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 PGLYRP2Q96PD5 576 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 PSKH2Q96QS6 385 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 SEPT5Q99719 369 aaPredicted RBP9.76□□□□□ -0.85
RTF1-206ENST00000560447 OMDQ99983 421 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 ZNF385DQ9H6B1 395 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 XPR1Q9UBH6 696 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 UXTQ9UBK9 157 aaPredicted RBP9.76□□□□□ -0.85
RTF1-206ENST00000560447 NKX1-2Q9UD57 310 aaPredicted RBP9.76□□□□□ -0.85
RTF1-206ENST00000560447 NUDT5Q9UKK9 219 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 TMCO1Q9UM00 188 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 CDYLQ9Y232 598 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 VWA7Q9Y334 891 aa9.76□□□□□ -0.85
RTF1-206ENST00000560447 RGSL1A5PLK6 1076 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 PFDN6O15212 129 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 LDB2O43679 373 aa9.75□□□□□ -0.85
RTF1-206ENST00000560447 FKTNO75072 461 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms