RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 CACNB4O00305 520 aaPredicted RBP14.19□□□□□ -0.14
TPM1-223ENST00000560445 CBFA2T2O43439 604 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 OPA1O60313 960 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 PIGNO95427 931 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 MT-CO3P00414 261 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 ELFN1P0C7U0 828 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 C6P13671 934 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 CTSEP14091 401 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 IGFALSP35858 605 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 EIF4A3P38919 411 aaKnown RBP14.19□□□□□ -0.14
TPM1-223ENST00000560445 MMP12P39900 470 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 CDH6P55285 790 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 INSM1Q01101 510 aaPredicted RBP14.19□□□□□ -0.14
TPM1-223ENST00000560445 DPYSQ14117 519 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 KRT81Q14533 505 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 LBRQ14739 615 aaKnown RBP14.19□□□□□ -0.14
TPM1-223ENST00000560445 NFATC4Q14934 902 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 NFKBIBQ15653 356 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 LUZP1Q86V48 1076 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 MAP7D3Q8IWC1 876 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 OR6C4Q8NGE1 309 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 SPOCK2Q92563 424 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 PEBP4Q96S96 227 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 ZNHIT6Q9NWK9 470 aaKnown RBP14.19□□□□□ -0.14
TPM1-223ENST00000560445 CWC15Q9P013 229 aaKnown RBP14.19□□□□□ -0.14
TPM1-223ENST00000560445 GGT7Q9UJ14 662 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 ANAPC7Q9UJX3 599 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 FREM2Q5SZK8 3169 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 DMXL2Q8TDJ6 3036 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 ZZEF1O43149 2961 aa14.19□□□□□ -0.14
TPM1-223ENST00000560445 URB1O60287 2271 aaKnown RBP14.18□□□□□ -0.14
TPM1-223ENST00000560445 ASPMQ8IZT6 3477 aa14.18□□□□□ -0.14
TPM1-223ENST00000560445 TAF4O00268 1085 aa14.18□□□□□ -0.14
TPM1-223ENST00000560445 SPINT1O43278 529 aa14.18□□□□□ -0.14
TPM1-223ENST00000560445 TCEA3O75764 348 aa14.18□□□□□ -0.14
TPM1-223ENST00000560445 SKILP12757 684 aa14.18□□□□□ -0.14
TPM1-223ENST00000560445 CA4P22748 312 aa14.18□□□□□ -0.14
TPM1-223ENST00000560445 ABCG1P45844 678 aa14.18□□□□□ -0.14
TPM1-223ENST00000560445 LIG3P49916 1009 aa14.18□□□□□ -0.14
TPM1-223ENST00000560445 PEX6Q13608 980 aa14.18□□□□□ -0.14
TPM1-223ENST00000560445 IRF4Q15306 451 aa14.18□□□□□ -0.14
TPM1-223ENST00000560445 CA9Q16790 459 aa14.18□□□□□ -0.14
TPM1-223ENST00000560445 ZNF542PQ5EBM4 170 aa14.18□□□□□ -0.14
TPM1-223ENST00000560445 PRRT3Q5FWE3 981 aa14.18□□□□□ -0.14
TPM1-223ENST00000560445 LRRC73Q5JTD7 316 aa14.18□□□□□ -0.14
TPM1-223ENST00000560445 C6orf132Q5T0Z8 1188 aa14.18□□□□□ -0.14
TPM1-223ENST00000560445 GKN2Q86XP6 184 aa14.18□□□□□ -0.14
TPM1-223ENST00000560445 TP53I13Q8NBR0 393 aaPredicted RBP14.18□□□□□ -0.14
TPM1-223ENST00000560445 TSEN2Q8NCE0 465 aaKnown RBP14.18□□□□□ -0.14
TPM1-223ENST00000560445 IFI44Q8TCB0 444 aa14.18□□□□□ -0.14
TPM1-223ENST00000560445 CTNNBL1Q8WYA6 563 aaPredicted RBP14.18□□□□□ -0.14
TPM1-223ENST00000560445 HSPH1Q92598 858 aa14.18□□□□□ -0.14
TPM1-223ENST00000560445 ECHDC3Q96DC8 303 aa14.18□□□□□ -0.14
TPM1-223ENST00000560445 NEBLO76041 1014 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 CYP2A6P11509 494 aaPredicted RBP14.17□□□□□ -0.14
TPM1-223ENST00000560445 CES1P23141 567 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 SSR1P43307 286 aaKnown RBP14.17□□□□□ -0.14
TPM1-223ENST00000560445 SCNN1BP51168 640 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 HK3P52790 923 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 EIF2B5Q13144 721 aaKnown RBP14.17□□□□□ -0.14
TPM1-223ENST00000560445 DEFB133Q30KQ1 61 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 E4F1Q66K89 784 aaPredicted RBP14.17□□□□□ -0.14
TPM1-223ENST00000560445 HGSNATQ68CP4 663 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 TIGD7Q6NT04 549 aaPredicted RBP14.17□□□□□ -0.14
TPM1-223ENST00000560445 ALKBH5Q6P6C2 394 aaKnown RBP14.17□□□□□ -0.14
TPM1-223ENST00000560445 DPPA4Q7L190 304 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 POLNQ7Z5Q5 900 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 CAMK1DQ8IU85 385 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 ARHGAP12Q8IWW6 846 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 ARFGAP1Q8N6T3 406 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 SNIP1Q8TAD8 396 aaKnown RBP14.17□□□□□ -0.14
TPM1-223ENST00000560445 FGF11Q92914 225 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 WDR92Q96MX6 357 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 CSPG4P5Q96PW8 444 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 NUDCD1Q96RS6 583 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 NUP85Q9BW27 656 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 DEF6Q9H4E7 631 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 UVRAGQ9P2Y5 699 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 KLQ9UEF7 1012 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 DNPEPQ9ULA0 475 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 DSPP15924 2871 aaKnown RBP14.17□□□□□ -0.14
TPM1-223ENST00000560445 ZFYVE26Q68DK2 2539 aa14.17□□□□□ -0.14
TPM1-223ENST00000560445 CPED1A4D0V7 1026 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 EME2A4GXA9 379 aaPredicted RBP14.16□□□□□ -0.14
TPM1-223ENST00000560445 TMX2-CTNND1H3BSU7 103 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 INSIG1O15503 277 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 ZW10O43264 779 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 CPP00450 1065 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 CYP1A2P05177 515 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 KRT7P08729 469 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 HOXC4P09017 264 aaPredicted RBP14.16□□□□□ -0.14
TPM1-223ENST00000560445 GIMD1P0DJR0 217 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 PBX1P40424 430 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 MLLT3P42568 568 aaPredicted RBP14.16□□□□□ -0.14
TPM1-223ENST00000560445 KIAA1024LP59773 190 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 SEMG2Q02383 582 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 SMTNL2Q2TAL5 461 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 WSCD2Q2TBF2 565 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 ZSCAN23Q3MJ62 389 aa14.16□□□□□ -0.14
TPM1-223ENST00000560445 CCDC122Q5T0U0 273 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms