RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	PHF21B	Q96EK2	531 aa		5.81	□□□□□ -1.48
LRRC49-223	ENST00000560369	IMP4	Q96G21	291 aa	Known RBP	5.81	□□□□□ -1.48
LRRC49-223	ENST00000560369	SCLY	Q96I15	445 aa		5.81	□□□□□ -1.48
LRRC49-223	ENST00000560369	ECSIT	Q9BQ95	431 aa		5.81	□□□□□ -1.48
LRRC49-223	ENST00000560369	CATSPERB	Q9H7T0	1116 aa		5.81	□□□□□ -1.48
LRRC49-223	ENST00000560369	GKN1	Q9NS71	199 aa		5.81	□□□□□ -1.48
LRRC49-223	ENST00000560369	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	5.81	□□□□□ -1.48
LRRC49-223	ENST00000560369	UXT	Q9UBK9	157 aa	Predicted RBP	5.81	□□□□□ -1.48
LRRC49-223	ENST00000560369	TLK1	Q9UKI8	766 aa		5.81	□□□□□ -1.48
LRRC49-223	ENST00000560369	ADAMTS6	Q9UKP5	1117 aa		5.81	□□□□□ -1.48
LRRC49-223	ENST00000560369	DSE	Q9UL01	958 aa		5.81	□□□□□ -1.48
LRRC49-223	ENST00000560369	TLR6	Q9Y2C9	796 aa		5.81	□□□□□ -1.48
LRRC49-223	ENST00000560369	AAR2	Q9Y312	384 aa	Known RBP	5.81	□□□□□ -1.48
LRRC49-223	ENST00000560369	PTGDR2	Q9Y5Y4	395 aa		5.81	□□□□□ -1.48
LRRC49-223	ENST00000560369	OBSL1	O75147	1896 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369		A0A1B0GTL3	188 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	MAGEB16	A2A368	324 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	MTMR11	A4FU01	709 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	UBFD1	O14562	309 aa	Known RBP	5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	ENPP3	O14638	875 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	FGF10	O15520	208 aa	Predicted RBP	5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	TRPA1	O75762	1119 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	ANXA9	O76027	345 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	OR6B1	O95007	311 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	SLC4A1	P02730	911 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	ATXN1L	P0C7T5	689 aa	Known RBP	5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	CPB1	P15086	417 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	GRIA2	P42262	883 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	GEM	P55040	296 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	PKNOX1	P55347	436 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	ACTR3	P61158	418 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	RPS24	P62847	133 aa	Known RBP	5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	YBX1	P67809	324 aa	Known RBP	5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	FAM189B	P81408	668 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	DSG1	Q02413	1049 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	FRG1	Q14331	258 aa	Known RBP	5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	ZRSR2	Q15696	482 aa	Known RBP	5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	TBC1D25	Q3MII6	688 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	LIPM	Q5VYY2	423 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	ZNF549	Q6P9A3	640 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	ARHGAP22	Q7Z5H3	698 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	MON1A	Q86VX9	555 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	SNX32	Q86XE0	403 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	CNTN4	Q8IWV2	1026 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	UMODL1-AS1	Q8N2C9	162 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	KDM1B	Q8NB78	822 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	USP13	Q92995	863 aa	Predicted RBP	5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	EXT2	Q93063	718 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	TBATA	Q96M53	351 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	RPRD1A	Q96P16	312 aa	Predicted RBP	5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	CASD1	Q96PB1	797 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	SEMA3C	Q99985	751 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	TUBB6	Q9BUF5	446 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	DRC3	Q9H069	523 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	POMK	Q9H5K3	350 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	ATP13A1	Q9HD20	1204 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	TCF7L2	Q9NQB0	619 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	VPS45	Q9NRW7	570 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	NDE1	Q9NXR1	346 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	MARCH2	Q9P0N8	246 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	GALP	Q9UBC7	116 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	IKZF3	Q9UKT9	509 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	ANGPTL2	Q9UKU9	493 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	ACOT9	Q9Y305	439 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	AK5	Q9Y6K8	562 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	ZFC3H1	O60293	1989 aa	Known RBP	5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	CHD9	Q3L8U1	2897 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	ATP6AP2	A0A1C7CYW4	349 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369		C9JVG2	144 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	LDB2	O43679	373 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	ATP6AP2	O75787	350 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	CCDC166	P0CW27	439 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	STMN1	P16949	149 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	YWHAQ	P27348	245 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	PIK3R1	P27986	724 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	COPA	P53621	1224 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	C1QTNF8	P60827	252 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	CDK18	Q07002	472 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	SREBF2	Q12772	1141 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	SLC12A1	Q13621	1099 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	MRPL58	Q14197	206 aa	Known RBP	5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	MAPRE1	Q15691	268 aa	Known RBP	5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	LIN52	Q52LA3	116 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	SFT2D3	Q587I9	215 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	GPR158	Q5T848	1215 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	MARC1	Q5VT66	337 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	NXN	Q6DKJ4	435 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	CLEC6A	Q6EIG7	209 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	MSANTD2	Q6P1R3	559 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	PGM2L1	Q6PCE3	622 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	CYHR1	Q6ZMK1	362 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	NET1	Q7Z628	596 aa	Predicted RBP	5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	LINC00523	Q86TU6	105 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	APLF	Q8IW19	511 aa	Predicted RBP	5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	OR6P1	Q8NGX9	317 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	BLOC1S5	Q8TDH9	187 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	PTER	Q96BW5	349 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	RCN3	Q96D15	328 aa		5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	CCDC97	Q96F63	343 aa	Predicted RBP	5.8	□□□□□ -1.48
LRRC49-223	ENST00000560369	DNAJC1	Q96KC8	554 aa	Known RBP	5.8	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms