RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 SPATA22Q8NHS9 363 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 CASS4Q9NQ75 786 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 TAS2R13Q9NYV9 303 aa10.73□□□□□ -0.69
CARMIL3-202ENST00000559694 RNASEH2AO75792 299 aaKnown RBP10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 MZF1P28698 734 aaPredicted RBP10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 RAB33AQ14088 237 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 PDE12Q6L8Q7 609 aaKnown RBP10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 OOSP2Q86WS3 158 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 NTAN1Q96AB6 310 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 TRAPPC9Q96Q05 1148 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 GORASP1Q9BQQ3 440 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 DTLQ9NZJ0 730 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 TAGLN3Q9UI15 199 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 BANF1O75531 89 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 PYGBP11216 843 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 LPOP22079 712 aaPredicted RBP10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 CES1P23141 567 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 RPA3P35244 121 aaPredicted RBP10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 SKIV2L2P42285 1042 aaKnown RBP10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 HADHBP55084 474 aaKnown RBP10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 FLOT2Q14254 428 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 UNC5AQ6ZN44 842 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 TAS1R1Q7RTX1 841 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 CMASQ8NFW8 434 aaPredicted RBP10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 FAM81AQ8TBF8 368 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 ABHD8Q96I13 439 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 NPY6RQ99463 290 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 YIPF2Q9BWQ6 316 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 SMOC2Q9H3U7 446 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 MRPL40Q9NQ50 206 aaKnown RBP10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 COMMD8Q9NX08 183 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 DNAJC16Q9Y2G8 782 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 RAI2Q9Y5P3 530 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 PHIPQ8WWQ0 1821 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 DGKIO75912 1065 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 OR56A5P0C7T3 313 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 CTSEP14091 401 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 CCNCP24863 283 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 PITX1P78337 314 aaPredicted RBP10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 HSPA14Q0VDF9 509 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 PTP4A2Q12974 167 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 DPYSL2Q16555 572 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 KBTBD12Q3ZCT8 623 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 LY6G5CQ5SRR4 150 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 ISLR2Q6UXK2 745 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 GPRIN1Q7Z2K8 1008 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 ANKRD33Q7Z3H0 272 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 PHOSPHO2Q8TCD6 241 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 HDAC10Q969S8 669 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 SIKE1Q9BRV8 207 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 EBF3Q9H4W6 596 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 VPS45Q9NRW7 570 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 CLCA2Q9UQC9 943 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 TSC22D4Q9Y3Q8 395 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 NR2E1Q9Y466 385 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 M0QZQ0 153 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 ELFN1P0C7U0 828 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 PABPC1P11940 636 aaKnown RBP10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 HLA-DPA1P20036 260 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 TPP2P29144 1249 aaPredicted RBP10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 ZNF132P52740 706 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 NTHL1P78549 312 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 GRSF1Q12849 480 aaKnown RBP eCLIP10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 HNRNPDQ14103 355 aaKnown RBP10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 GRM2Q14416 872 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 DLG2Q15700 870 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 CERCAMQ5T4B2 595 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 CWF19L1Q69YN2 538 aaKnown RBP10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 NMUR1Q9HB89 426 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 PAK6Q9NQU5 681 aaPredicted RBP10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 CATSPERZQ9NTU4 200 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 NMRK1Q9NWW6 199 aa10.72□□□□□ -0.69
CARMIL3-202ENST00000559694 MATN3O15232 486 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 TM9SF1O15321 606 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 COCHO43405 550 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 GLRA3O75311 464 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 MT-CYBP00156 380 aaPredicted RBP10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 FGF1P05230 155 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 APOA4P06727 396 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 CSKP41240 450 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 NDST2P52849 883 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 EFTUD2Q15029 972 aaKnown RBP eCLIP10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 TBCCQ15814 346 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 FAM26DQ5JW98 314 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 FAM182AQ5T1J6 154 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 LRRC8EQ6NSJ5 796 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 WDTC1Q8N5D0 677 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 ZNF366Q8N895 744 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 NKD2Q969F2 451 aaPredicted RBP10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 CATSPER2Q96P56 530 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 DZANK1Q9NVP4 752 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 AURKCQ9UQB9 309 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 HS3ST4Q9Y661 456 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 C5orf60A6NFR6 353 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 ETS2P15036 469 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 EPCAMP16422 314 aa10.71□□□□□ -0.69
CARMIL3-202ENST00000559694 MTHFRP42898 656 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms