RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 WDR92Q96MX6 357 aa9.04□□□□□ -0.96
SNRPA1-208ENST00000559686 HAPLN3Q96S86 360 aa9.04□□□□□ -0.96
SNRPA1-208ENST00000559686 APOOQ9BUR5 198 aa9.04□□□□□ -0.96
SNRPA1-208ENST00000559686 TRIM62Q9BVG3 475 aa9.04□□□□□ -0.96
SNRPA1-208ENST00000559686 INTS2Q9H0H0 1204 aaKnown RBP9.04□□□□□ -0.96
SNRPA1-208ENST00000559686 TMEM168Q9H0V1 697 aa9.04□□□□□ -0.96
SNRPA1-208ENST00000559686 THAP9Q9H5L6 903 aa9.04□□□□□ -0.96
SNRPA1-208ENST00000559686 NPDC1Q9NQX5 325 aaPredicted RBP9.04□□□□□ -0.96
SNRPA1-208ENST00000559686 TMEM9Q9P0T7 183 aa9.04□□□□□ -0.96
SNRPA1-208ENST00000559686 LUZP4Q9P127 313 aa9.04□□□□□ -0.96
SNRPA1-208ENST00000559686 PCDHGA3Q9Y5H0 932 aa9.04□□□□□ -0.96
SNRPA1-208ENST00000559686 KCNMB2Q9Y691 235 aa9.04□□□□□ -0.96
SNRPA1-208ENST00000559686 CELSR1Q9NYQ6 3014 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 TMEM202A6NGA9 273 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 CAPN5O15484 640 aaPredicted RBP9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 ACTN4O43707 911 aaKnown RBP9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 TBXAS1P24557 533 aaPredicted RBP9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 CD1CP29017 333 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 GPD2P43304 727 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 ACADSBP45954 432 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 ME1P48163 572 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 COPB1P53618 953 aaKnown RBP9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 ARF5P84085 180 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 EIF4EBP2Q13542 120 aaPredicted RBP9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 ERV3-1Q14264 604 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 STILQ15468 1287 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 NFIL3Q16649 462 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 WSCD2Q2TBF2 565 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 EDRF1Q3B7T1 1238 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 PRR30Q53SZ7 412 aaPredicted RBP9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 ATXN7L2Q5T6C5 722 aaPredicted RBP9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 DCAF12Q5T6F0 453 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 RETSATQ6NUM9 610 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 TIPARPQ7Z3E1 657 aaKnown RBP9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 TMEM135Q86UB9 458 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 ZSCAN30Q86W11 494 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 IRF2BP1Q8IU81 584 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 DRC7Q8IY82 874 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 AGBL5Q8NDL9 886 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 POM121Q96HA1 1249 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 ZNF396Q96N95 335 aaPredicted RBP9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 NT5C1BQ96P26 610 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 RBM15Q96T37 977 aaKnown RBP eCLIP9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 DDA1Q9BW61 102 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 B3GNT4Q9C0J1 378 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 CYP4F12Q9HCS2 524 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 FGF22Q9HCT0 170 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 ANLNQ9NQW6 1124 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 CUEDC1Q9NWM3 386 aaPredicted RBP9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 TLK1Q9UKI8 766 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 PILRAQ9UKJ1 303 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 MED13Q9UHV7 2174 aa9.03□□□□□ -0.96
SNRPA1-208ENST00000559686 FAM170AA1A519 330 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 HGSO14964 777 aaPredicted RBP9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 AREL1O15033 823 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 NUDT21O43809 227 aaKnown RBP9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 SRGAP2O75044 1071 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 ZMPSTE24O75844 475 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 DNAJB5O75953 348 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 DDAH2O95865 285 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 FURINP09958 794 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 KRT5P13647 590 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 PNLIPP16233 465 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 XPAP23025 273 aaPredicted RBP9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 MAP4P27816 1152 aaKnown RBP9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 ACVRL1P37023 503 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 PEX5P50542 639 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 LIMK2P53671 638 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 ENPEPQ07075 957 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 NADK2Q4G0N4 442 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 RESP18Q5W5W9 173 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 ANKRD40Q6AI12 368 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 OGFOD3Q6PK18 319 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 GDPD4Q6W3E5 623 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 BEND5Q7L4P6 421 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 ZNF761Q86XN6 746 aaPredicted RBP9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 SMYD4Q8IYR2 804 aaPredicted RBP9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 PLA2G15Q8NCC3 412 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 PATE1Q8WXA2 126 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 CCDC47Q96A33 483 aaKnown RBP9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 ARHGEF26Q96DR7 871 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 PCMTD1Q96MG8 357 aaPredicted RBP9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 MED15Q96RN5 788 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 ASPSCR1Q9BZE9 553 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 CEP44Q9C0F1 390 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 TKTL2Q9H0I9 626 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 APMAPQ9HDC9 416 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 PIGVQ9NUD9 493 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 SPATS2LQ9NUQ6 558 aaKnown RBP9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 PCDHA7Q9UN72 937 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 COQ4Q9Y3A0 265 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 KCTD3Q9Y597 815 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 ADGRG4Q8IZF6 3080 aa9.02□□□□□ -0.97
SNRPA1-208ENST00000559686 CSMD2Q7Z408 3487 aa9.01□□□□□ -0.97
SNRPA1-208ENST00000559686 ARHGAP10A1A4S6 786 aa9.01□□□□□ -0.97
SNRPA1-208ENST00000559686 WIPF3A6NGB9 483 aa9.01□□□□□ -0.97
SNRPA1-208ENST00000559686 TMEM110-MUSTN1A8MSY1 372 aa9.01□□□□□ -0.97
SNRPA1-208ENST00000559686 TCP11X1B4DZS4 312 aa9.01□□□□□ -0.97
SNRPA1-208ENST00000559686 I6L893 689 aaPredicted RBP9.01□□□□□ -0.97
SNRPA1-208ENST00000559686 CETN3O15182 167 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms