RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, human

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABPB1-208	ENST00000558970	WDR5B	Q86VZ2	330 aa		12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	TBC1D3	Q8IZP1	549 aa	Predicted RBP	12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	PDCD7	Q8N8D1	485 aa	Known RBP	12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	GRK7	Q8WTQ7	553 aa		12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	SNX19	Q92543	992 aa		12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	ATOH1	Q92858	354 aa	Predicted RBP	12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	KLK6	Q92876	244 aa		12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	RTP4	Q96DX8	246 aa		12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	LRIG1	Q96JA1	1093 aa		12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	MRGPRX2	Q96LB1	330 aa		12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	ZNF641	Q96N77	438 aa	Predicted RBP	12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	FCRL5	Q96RD9	977 aa		12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	HINFP	Q9BQA5	517 aa		12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	WRAP53	Q9BUR4	548 aa	Known RBP	12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	TRIM31	Q9BZY9	425 aa		12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	BTBD1	Q9H0C5	482 aa		12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	ETNK1	Q9HBU6	452 aa		12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	ITM2C	Q9NQX7	267 aa		12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	FAM86C1	Q9NVL1	165 aa		12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	USP36	Q9P275	1121 aa	Known RBP	12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	PAK5	Q9P286	719 aa		12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	MBD1	Q9UIS9	605 aa	Predicted RBP	12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	SCML1	Q9UN30	329 aa		12.52	□□□□□ -0.41
GABPB1-208	ENST00000558970	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	UPK3BL1	B0FP48	263 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	UPK3BL2	E5RIL1	263 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	SOCS5	O75159	536 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	ZNF217	O75362	1048 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	SEMA4F	O95754	770 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	AGT	P01019	485 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	TIMP2	P16035	220 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	CA4	P22748	312 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	CD6	P30203	668 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	TAS2R38	P59533	333 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	PPP2CB	P62714	309 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	PPP2CA	P67775	309 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	LMNB2	Q03252	620 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	ZBTB16	Q05516	673 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	CDK18	Q07002	472 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	MPP3	Q13368	585 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	UGP2	Q16851	508 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	PARP6	Q2NL67	630 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	RALGPS1	Q5JS13	557 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	KDELC1	Q6UW63	502 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	USP30	Q70CQ3	517 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	CEP68	Q76N32	757 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	KBTBD6	Q86V97	674 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	TMEFF1	Q8IYR6	380 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	C6orf106	Q9H6K1	298 aa	Predicted RBP	12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	PCDH12	Q9NPG4	1184 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	ASIC3	Q9UHC3	531 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	COQ6	Q9Y2Z9	468 aa		12.51	□□□□□ -0.41
GABPB1-208	ENST00000558970	ABCA7	Q8IZY2	2146 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	SPINT1	O43278	529 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	HTRA2	O43464	458 aa	Predicted RBP	12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	HR	O43593	1189 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	PLRG1	O43660	514 aa	Known RBP	12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	ZNF189	O75820	626 aa	Predicted RBP	12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	ANXA9	O76027	345 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	FSBP	O95073	299 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	PRL	P01236	227 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	APRT	P07741	180 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	NBL1	P41271	181 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	PTGIR	P43119	386 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	SFSWAP	Q12872	951 aa	Known RBP	12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	MTM1	Q13496	603 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	SIRPB2	Q5JXA9	342 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	BRAT1	Q6PJG6	821 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	JAML	Q86YT9	394 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	PIH1D2	Q8WWB5	315 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	GAB3	Q8WWW8	586 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	ECHDC3	Q96DC8	303 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	MYOC	Q99972	504 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	TBL1Y	Q9BQ87	522 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	CARD6	Q9BX69	1037 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	HDAC8	Q9BY41	377 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	ZSCAN32	Q9NX65	697 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	WSB2	Q9NYS7	404 aa	Predicted RBP	12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	DKK3	Q9UBP4	350 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	B4GALT6	Q9UBX8	382 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	PCYOX1	Q9UHG3	505 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	FZD4	Q9ULV1	537 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	PHTF1	Q9UMS5	762 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	AAR2	Q9Y312	384 aa	Known RBP	12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	ATXN2	Q99700	1313 aa	Known RBP	12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	TRPM6	Q9BX84	2022 aa		12.5	□□□□□ -0.41
GABPB1-208	ENST00000558970	BPTF	Q12830	3046 aa		12.49	□□□□□ -0.41
GABPB1-208	ENST00000558970	SPAG17	Q6Q759	2223 aa		12.49	□□□□□ -0.41
GABPB1-208	ENST00000558970	TSPAN11	A1L157	253 aa		12.49	□□□□□ -0.41
GABPB1-208	ENST00000558970	GOLGA6C	A6NDK9	693 aa		12.49	□□□□□ -0.41
GABPB1-208	ENST00000558970	GOLGA6B	A6NDN3	693 aa		12.49	□□□□□ -0.41
GABPB1-208	ENST00000558970	NPIPB15	A6NHN6	443 aa	Predicted RBP	12.49	□□□□□ -0.41
GABPB1-208	ENST00000558970	LRRC72	A6NJI9	287 aa		12.49	□□□□□ -0.41
GABPB1-208	ENST00000558970	MEI4	A8MW99	385 aa		12.49	□□□□□ -0.41
GABPB1-208	ENST00000558970	RAD51C	O43502	376 aa		12.49	□□□□□ -0.41
GABPB1-208	ENST00000558970	FZD6	O60353	706 aa		12.49	□□□□□ -0.41
GABPB1-208	ENST00000558970	MMP20	O60882	483 aa		12.49	□□□□□ -0.41
GABPB1-208	ENST00000558970	RNGTT	O60942	597 aa	Known RBP	12.49	□□□□□ -0.41
GABPB1-208	ENST00000558970	GOLGA6D	P0CG33	693 aa		12.49	□□□□□ -0.41
GABPB1-208	ENST00000558970	OXTR	P30559	389 aa		12.49	□□□□□ -0.41

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