RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 SAYSD1Q9NPB0 183 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 RAB6BQ9NRW1 208 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 NINJ2Q9NZG7 142 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 MARK1Q9P0L2 795 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 SEPT10Q9P0V9 454 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 XPO7Q9UIA9 1087 aaKnown RBP13.69□□□□□ -0.22
TMED3-205ENST00000558562 DNMT3LQ9UJW3 386 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 NFS1Q9Y697 457 aa13.69□□□□□ -0.22
TMED3-205ENST00000558562 ZNF462Q96JM2 2506 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 GOLGA6L10A6NI86 522 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 GOLGA8MH3BSY2 632 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 RNF103O00237 685 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 TMEM63AO94886 807 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 ATP5C1P36542 298 aaKnown RBP13.68□□□□□ -0.22
TMED3-205ENST00000558562 IL12RB1P42701 662 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 ARL4CP56559 192 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 COG7P83436 770 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 ZNF844Q08AG5 666 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 GALNT2Q10471 571 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 MTA1Q13330 715 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 KCNJ11Q14654 390 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 HIF1AQ16665 826 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 KIF19Q2TAC6 998 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 MS4A13Q5J8X5 152 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 DHRS13Q6UX07 377 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 PPP1R21Q6ZMI0 780 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 CENPUQ71F23 418 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 C14orf80Q86SX3 495 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 METTL3Q86U44 580 aaKnown RBP13.68□□□□□ -0.22
TMED3-205ENST00000558562 TMPRSS6Q8IU80 811 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 RELL1Q8IUW5 271 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 TP53INP2Q8IXH6 220 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 LZTR1Q8N653 840 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 PDCD7Q8N8D1 485 aaKnown RBP13.68□□□□□ -0.22
TMED3-205ENST00000558562 C1orf216Q8TAB5 229 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 HDAC11Q96DB2 347 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 SIPA1Q96FS4 1042 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 C1orf74Q96LT6 269 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 PHACTR1Q9C0D0 580 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 PCDHGB2Q9Y5G2 931 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 SNX11Q9Y5W9 270 aa13.68□□□□□ -0.22
TMED3-205ENST00000558562 TMEM131Q92545 1883 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 NUMA1Q14980 2115 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 TCRBV7S3A2A0A539 114 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 PLK4O00444 970 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 POLR3GO15318 223 aaPredicted RBP13.67□□□□□ -0.22
TMED3-205ENST00000558562 EIF3HO15372 352 aaKnown RBP eCLIP13.67□□□□□ -0.22
TMED3-205ENST00000558562 ACSL3O95573 720 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 FDFT1P37268 417 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 MAGEA4P43358 317 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 CLDN6P56747 220 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 PPIDQ08752 370 aaKnown RBP13.67□□□□□ -0.22
TMED3-205ENST00000558562 SLC29A2Q14542 456 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 SMAD1Q15797 465 aaKnown RBP13.67□□□□□ -0.22
TMED3-205ENST00000558562 GEN1Q17RS7 908 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 KRT71Q3SY84 523 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 ANKRD20A2Q5SQ80 823 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 UBAP2Q5T6F2 1119 aaKnown RBP13.67□□□□□ -0.22
TMED3-205ENST00000558562 ACBD5Q5T8D3 534 aaPredicted RBP13.67□□□□□ -0.22
TMED3-205ENST00000558562 FAXCQ5TGI0 409 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 ANKRD20A1Q5TYW2 823 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 ANKRD20A3Q5VUR7 823 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 RAP1GAP2Q684P5 730 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 NUGGCQ68CJ6 796 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 KLHDC10Q6PID8 442 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 LAYNQ6UX15 382 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 LRRC31Q6UY01 552 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 CHSY1Q86X52 802 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 RTL3Q8N8U3 475 aaKnown RBP13.67□□□□□ -0.22
TMED3-205ENST00000558562 CELF6Q96J87 481 aaKnown RBP13.67□□□□□ -0.22
TMED3-205ENST00000558562 TTC25Q96NG3 672 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 ETNK1Q9HBU6 452 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 LSM7Q9UK45 103 aaKnown RBP13.67□□□□□ -0.22
TMED3-205ENST00000558562 VANGL2Q9ULK5 521 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 KNTC1P50748 2209 aa13.67□□□□□ -0.22
TMED3-205ENST00000558562 WASH4PA8MWX3 477 aa13.66□□□□□ -0.22
TMED3-205ENST00000558562 MTSS1O43312 755 aa13.66□□□□□ -0.22
TMED3-205ENST00000558562 TNFSF14O43557 240 aa13.66□□□□□ -0.22
TMED3-205ENST00000558562 SYNCRIPO60506 623 aaKnown RBP13.66□□□□□ -0.22
TMED3-205ENST00000558562 TTC4O95801 387 aa13.66□□□□□ -0.22
TMED3-205ENST00000558562 SHBGP04278 402 aa13.66□□□□□ -0.22
TMED3-205ENST00000558562 MYZAPP0CAP1 466 aa13.66□□□□□ -0.22
TMED3-205ENST00000558562 RHOQP17081 205 aa13.66□□□□□ -0.22
TMED3-205ENST00000558562 OXTRP30559 389 aa13.66□□□□□ -0.22
TMED3-205ENST00000558562 GARSP41250 739 aaKnown RBP13.66□□□□□ -0.22
TMED3-205ENST00000558562 MAGEA6P43360 314 aa13.66□□□□□ -0.22
TMED3-205ENST00000558562 IL9RQ01113 521 aa13.66□□□□□ -0.22
TMED3-205ENST00000558562 PDIA2Q13087 525 aaKnown RBP13.66□□□□□ -0.22
TMED3-205ENST00000558562 AUHQ13825 339 aaKnown RBP13.66□□□□□ -0.22
TMED3-205ENST00000558562 SUZ12Q15022 739 aaKnown RBP13.66□□□□□ -0.22
TMED3-205ENST00000558562 KYNUQ16719 465 aa13.66□□□□□ -0.22
TMED3-205ENST00000558562 PTPRNQ16849 979 aa13.66□□□□□ -0.22
TMED3-205ENST00000558562 TTMPQ5BVD1 217 aa13.66□□□□□ -0.22
TMED3-205ENST00000558562 FAM182AQ5T1J6 154 aa13.66□□□□□ -0.22
TMED3-205ENST00000558562 ARTNQ5T4W7 220 aa13.66□□□□□ -0.22
TMED3-205ENST00000558562 CCDC13Q8IYE1 715 aa13.66□□□□□ -0.22
TMED3-205ENST00000558562 ZNF683Q8IZ20 524 aa13.66□□□□□ -0.22
TMED3-205ENST00000558562 ATPAF2Q8N5M1 289 aa13.66□□□□□ -0.22
TMED3-205ENST00000558562 UHMK1Q8TAS1 419 aaKnown RBP13.66□□□□□ -0.22
TMED3-205ENST00000558562 SORCS1Q8WY21 1168 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms