RNA–Protein interactions for RNA: ENST00000558554.5

IDH3A-207, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2 BASIC

Gene IDH3A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-207ENST00000558554 ZNF599Q96NL3 588 aa12.66□□□□□ -0.38
IDH3A-207ENST00000558554 NUDCD1Q96RS6 583 aa12.66□□□□□ -0.38
IDH3A-207ENST00000558554 MGME1Q9BQP7 344 aa12.66□□□□□ -0.38
IDH3A-207ENST00000558554 MBNL1Q9NR56 388 aaKnown RBP12.66□□□□□ -0.38
IDH3A-207ENST00000558554 DDX56Q9NY93 547 aaKnown RBP12.66□□□□□ -0.38
IDH3A-207ENST00000558554 DTLQ9NZJ0 730 aa12.66□□□□□ -0.38
IDH3A-207ENST00000558554 FTSJ1Q9UET6 329 aa12.66□□□□□ -0.38
IDH3A-207ENST00000558554 REXO2Q9Y3B8 237 aaKnown RBP12.66□□□□□ -0.38
IDH3A-207ENST00000558554 CNOT1A5YKK6 2376 aaKnown RBP12.66□□□□□ -0.38
IDH3A-207ENST00000558554 MYLKQ15746 1914 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 RIOK3O14730 519 aaKnown RBP12.65□□□□□ -0.38
IDH3A-207ENST00000558554 HYAL3O43820 417 aaPredicted RBP12.65□□□□□ -0.38
IDH3A-207ENST00000558554 LCA5LO95447 670 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 SLC4A1P02730 911 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 HLA-DQB2P05538 268 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 CCNB1P14635 433 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 CDC25BP30305 580 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 GRK6P43250 576 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 THOP1P52888 689 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 EPHB1P54762 984 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 TRAF2Q12933 501 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 ACOX1Q15067 660 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 SHBQ15464 509 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 CCDC181Q5TID7 509 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 CCDC13Q8IYE1 715 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 PLD5Q8N7P1 536 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 TPCN2Q8NHX9 752 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 KRT35Q92764 455 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 FAF2Q96CS3 445 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 BMFQ96LC9 184 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 C1QTNF7Q9BXJ2 289 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 POLR1EQ9GZS1 481 aaKnown RBP12.65□□□□□ -0.38
IDH3A-207ENST00000558554 DKK3Q9UBP4 350 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 CABIN1Q9Y6J0 2220 aa12.65□□□□□ -0.38
IDH3A-207ENST00000558554 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.64□□□□□ -0.39
IDH3A-207ENST00000558554 C3orf70A6NLC5 250 aaPredicted RBP12.64□□□□□ -0.39
IDH3A-207ENST00000558554 AREL1O15033 823 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 PSTPIP1O43586 416 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 JCHAINP01591 159 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 PTMAP06454 111 aaKnown RBP12.64□□□□□ -0.39
IDH3A-207ENST00000558554 ALPIP09923 528 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 FTH1P19P0C7X4 201 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 MX2P20592 715 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 EPHA8P29322 1005 aaPredicted RBP12.64□□□□□ -0.39
IDH3A-207ENST00000558554 MMP12P39900 470 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 FOXK2Q01167 660 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 PCSK7Q16549 785 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 INAVAQ3KP66 663 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 SPOCD1Q6ZMY3 1216 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 RD3Q7Z3Z2 195 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 ZC3H18Q86VM9 953 aaKnown RBP12.64□□□□□ -0.39
IDH3A-207ENST00000558554 AGAP3Q96P47 875 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 SMIM14Q96QK8 99 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 HEMGNQ9BXL5 484 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 LACRTQ9GZZ8 138 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 UCKL1Q9NWZ5 548 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 MOSPD1Q9UJG1 213 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 PACSIN2Q9UNF0 486 aaPredicted RBP12.64□□□□□ -0.39
IDH3A-207ENST00000558554 CHKBQ9Y259 395 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.64□□□□□ -0.39
IDH3A-207ENST00000558554 OR1A2Q9Y585 309 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 RAI2Q9Y5P3 530 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 PPP1R12AO14974 1030 aaPredicted RBP12.64□□□□□ -0.39
IDH3A-207ENST00000558554 MATN3O15232 486 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 CST8O60676 142 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 ATXN1LP0C7T5 689 aaKnown RBP12.64□□□□□ -0.39
IDH3A-207ENST00000558554 ZNF883P0CG24 379 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 MYF5P13349 255 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 PECAM1P16284 738 aaPredicted RBP12.64□□□□□ -0.39
IDH3A-207ENST00000558554 CCNCP24863 283 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 HSPA9P38646 679 aaKnown RBP12.64□□□□□ -0.39
IDH3A-207ENST00000558554 RABIFP47224 123 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 CSNK1DP48730 415 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 VAV2P52735 878 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 POLR2LP62875 67 aaKnown RBP12.64□□□□□ -0.39
IDH3A-207ENST00000558554 NSUN2Q08J23 767 aaKnown RBP eCLIP12.64□□□□□ -0.39
IDH3A-207ENST00000558554 ZBTB17Q13105 803 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 DNAJC3Q13217 504 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 LRRC14Q15048 493 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 HS1BP3Q53T59 392 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 TPRG1LQ5T0D9 272 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 ARMC12Q5T9G4 340 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 KYAT3Q6YP21 454 aaKnown RBP12.64□□□□□ -0.39
IDH3A-207ENST00000558554 ABI3BPQ7Z7G0 1075 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 IQCHQ86VS3 1027 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 CHCHD4Q8N4Q1 142 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 OXR1Q8N573 874 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 LPCAT1Q8NF37 534 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 HDAC11Q96DB2 347 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 CNDP2Q96KP4 475 aaKnown RBP12.64□□□□□ -0.39
IDH3A-207ENST00000558554 KLF6Q99612 283 aaPredicted RBP12.64□□□□□ -0.39
IDH3A-207ENST00000558554 FAM118BQ9BPY3 351 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 C1QTNF2Q9BXJ5 285 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 IMPACTQ9P2X3 320 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 B4GALT6Q9UBX8 382 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 CD84Q9UIB8 345 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 ANGPTL2Q9UKU9 493 aa12.64□□□□□ -0.39
IDH3A-207ENST00000558554 COL5A1P20908 1838 aaPredicted RBP12.63□□□□□ -0.39
IDH3A-207ENST00000558554 TSPAN11A1L157 253 aa12.63□□□□□ -0.39
IDH3A-207ENST00000558554 C10orf142B7Z368 130 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms